Cow genome map
| Conread name: | Ss1.1-OvF2-UMC-p2mm4-014-f04.3 |
| Conread position: | 1-253 |
| Cow position: | chr3:62743211-62743463 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-307 |
| Cow position: | chr3:62743127-62743433 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 173, 179 |
| Conread position: | 1-348 |
| Cow position: | chr3:68045804-68046151 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 94, 103 |
| Conread position: | 1-372 |
| Cow position: | chr3:68027127-68027498 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-426 |
| Cow position: | chr3:68045720-68046144 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 389, 0 |
| Conread position: | 1-451 |
| Cow position: | chr3:62722038-62721589 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 395, 0 |
| Conread position: | 2-220 |
| Cow position: | chr3:62721785-62721567 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-358 |
| Cow position: | chr3:62742648-62743002 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 11 |
| Conread position: | 2-371 |
| Cow position: | chr3:62742898-62743245 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 244 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 2-451 |
| Cow position: | chr3:62722205-62721757 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 390, 0 |
| Conread position: | 2-452 |
| Cow position: | chr3:68045889-68046338 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 283 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 394, 0 |
| Conread position: | 2-506 |
| Cow position: | chr3:62742482-62742978 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 320 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 3-256 |
| Cow position: | chr3:68027465-68027718 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-451 |
| Cow position: | chr3:62742400-62742841 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 14-506 |
| Cow position: | chr3:62722109-62721621 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 379, 0 |
| Conread position: | 15-436 |
| Cow position: | chr3:62743062-62743476 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 15-451 |
| Cow position: | chr3:62722276-62721841 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 377, 0 |
| Conread position: | 19-391 |
| Cow position: | chr3:20194859-20195231 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 215, 210 |
| Conread position: | 21-348 |
| Cow position: | chr3:68026979-68027306 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 21-459 |
| Cow position: | chr3:68045572-68046009 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 24-309 |
| Cow position: | chr3:62742751-62743032 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 131, 152 |
| Conread position: | 24-370 |
| Cow position: | chr3:62721931-62721585 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-418 |
| Cow position: | chr3:62742253-62742645 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 28-370 |
| Cow position: | chr3:62742341-62742679 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 241, 14 |
| Conread position: | 28-372 |
| Cow position: | chr3:77350934-77350593 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 86, 74 |
| Conread position: | 29-298 |
| Cow position: | chr3:62721842-62721573 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 29-366 |
| Cow position: | chr3:68027407-68027744 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 223, 237 |
| Conread position: | 34-220 |
| Cow position: | chr3:16020395-16020209 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-339 |
| Cow position: | chr3:68027076-68027381 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-506 |
| Cow position: | chr3:68045669-68046137 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 0 |
| Conread position: | 35-498 |
| Cow position: | chr3:68027245-68027704 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 289 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 361, 0 |
| Conread position: | 45-370 |
| Cow position: | chr3:62722331-62722005 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 51-379 |
| Cow position: | chr3:20194975-20195303 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 200, 204 |
| Conread position: | 97-506 |
| Cow position: | chr3:62722362-62721957 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 261 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 119-430 |
| Cow position: | chr3:68026993-68027303 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 273, 0 |
Show alignments to all cow chromosomes.