Cow genome map
Conread name: | Ss1.1-OvF2-UMC-p2mm4-014-f04.3 |
Conread position: | 1-256 |
Cow position: | chr6:49341195-49341449 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 182 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 245, 0 |
Conread position: | 1-313 |
Cow position: | chr6:49341111-49341423 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-383 |
Cow position: | chr6:49396328-49396710 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 196 |
Conread position: | 1-390 |
Cow position: | chr6:49340607-49340996 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-391 |
Cow position: | chr6:49428263-49428653 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 237 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 329, 337 |
Conread position: | 1-391 |
Cow position: | chr6:49428431-49428821 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 239 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 281, 273 |
Conread position: | 1-442 |
Cow position: | chr6:49396412-49396852 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 277 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 388, 0 |
Conread position: | 1-459 |
Cow position: | chr6:49340439-49340896 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 281 |
Conread position: | 2-402 |
Cow position: | chr6:49340524-49340925 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 384, 0 |
Conread position: | 2-506 |
Cow position: | chr6:49340860-49341360 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 28 |
Conread position: | 19-370 |
Cow position: | chr6:49341045-49341396 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 20-483 |
Cow position: | chr6:49340962-49341423 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 372, 0 |
Conread position: | 27-458 |
Cow position: | chr6:49362400-49362818 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 266 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 231, 0 |
Conread position: | 28-380 |
Cow position: | chr6:49396271-49396623 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 28-391 |
Cow position: | chr6:49428710-49429073 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 226 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 84, 73 |
Conread position: | 29-254 |
Cow position: | chr6:49396776-49397001 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 151 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-324 |
Cow position: | chr6:49396692-49396987 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 196 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 252, 247 |
Conread position: | 29-384 |
Cow position: | chr6:49429131-49429486 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 234 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 252, 235 |
Conread position: | 29-390 |
Cow position: | chr6:49396524-49396885 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-390 |
Cow position: | chr6:49428963-49429324 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 216 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 29-443 |
Cow position: | chr6:49396194-49396601 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 275 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 222, 34 |
Conread position: | 29-443 |
Cow position: | chr6:49428795-49429208 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 249 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 161, 154 |
Conread position: | 29-451 |
Cow position: | chr6:49340719-49341140 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 357, 380 |
Conread position: | 29-452 |
Cow position: | chr6:49429047-49429469 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 261 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 364, 381 |
Conread position: | 29-489 |
Cow position: | chr6:49340803-49341261 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 364, 0 |
Conread position: | 31-437 |
Cow position: | chr6:49396112-49396511 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 266 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 17, 25 |
Conread position: | 34-488 |
Cow position: | chr6:49340388-49340840 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 285 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 359, 0 |
Conread position: | 38-391 |
Cow position: | chr6:49428384-49428737 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 235 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 37, 33 |
Conread position: | 71-391 |
Cow position: | chr6:49428249-49428569 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 199 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 217, 206 |
Conread position: | 92-508 |
Cow position: | chr6:49340362-49340774 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 260 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 226, 222 |
Show alignments to all cow chromosomes.