Cow genome map

Conread name: Ss1.1-OvF2-UMC-p2mm4-014-f04.3

Conread position: 1-436
Cow position: chrX:25325636-25325202 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 268
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 388, 0

Conread position: 1-463
Cow position: chrX:25324712-25324253 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 288

Conread position: 1-488
Cow position: chrX:29045225-29044740 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 272

Conread position: 1-508
Cow position: chrX:25309841-25310344 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 347

Conread position: 2-313
Cow position: chrX:29044972-29044661 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 2-451
Cow position: chrX:29045140-29044692 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 0

Conread position: 2-489
Cow position: chrX:25324963-25324478 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 307
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 90, 98

Conread position: 6-384
Cow position: chrX:29045052-29044674 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-488
Cow position: chrX:25325378-25324899 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 302
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 251, 266

Conread position: 8-255
Cow position: chrX:29045701-29045454 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 9-459
Cow position: chrX:25325122-25324675 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 10

Conread position: 10-506
Cow position: chrX:25325794-25325303 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 309
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 411, 6

Conread position: 11-391
Cow position: chrX:13826903-13826523 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 239
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 84, 95

Conread position: 16-509
Cow position: chrX:29045376-29044889 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 295
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 59

Conread position: 18-451
Cow position: chrX:25309690-25310122 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 254

Conread position: 27-489
Cow position: chrX:25310035-25310495 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 290
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 66, 74

Conread position: 28-328
Cow position: chrX:25310288-25310587 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 197
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 292, 0

Conread position: 29-306
Cow position: chrX:25324516-25324239 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 71

Conread position: 29-371
Cow position: chrX:25324768-25324426 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 29-390
Cow position: chrX:25310205-25310566 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 63, 77

Conread position: 29-424
Cow position: chrX:13826717-13826323 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 252
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 66, 77

Conread position: 29-424
Cow position: chrX:13826801-13826407 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 237
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 364, 0

Conread position: 29-437
Cow position: chrX:25325020-25324613 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 260
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 367, 0

Conread position: 29-437
Cow position: chrX:25325524-25325117 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 232

Conread position: 29-453
Cow position: chrX:13826633-13826210 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 261
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 300, 308

Conread position: 29-463
Cow position: chrX:25325440-25325009 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 0

Conread position: 29-488
Cow position: chrX:25325272-25324815 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 288
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 162, 166

Conread position: 29-488
Cow position: chrX:29045281-29044824 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 289
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 361, 0

Conread position: 29-505
Cow position: chrX:25325188-25324716 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 361, 0

Conread position: 35-339
Cow position: chrX:29045758-29045454 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 193
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 45-427
Cow position: chrX:29045832-29045451 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 235
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 61

Conread position: 51-330
Cow position: chrX:13826947-13826668 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 113-340
Cow position: chrX:14181327-14181100 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 113-424
Cow position: chrX:14181411-14181101 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 202
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 73, 61

Conread position: 156-489
Cow position: chrX:25309660-25309991 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 211
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 42

Show alignments to all cow chromosomes.