Cow genome map


           Conread name:
           Ss1.1-Ova1-OVR010017A10.5
        

               Conread position:
               8-129
               

               Cow position:
               chr8:30076148-30076026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               123-254
               

               Cow position:
               chr8:30074131-30074000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               121
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               251-326
               

               Cow position:
               chr8:30073639-30073564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               76
               

               Alignm identity:
               73
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               326-443
               

               Cow position:
               chr8:30073015-30072898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               444-539
               

               Cow position:
               chr8:30071813-30071718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               531-637
               

               Cow position:
               chr8:30070696-30070590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               637-774
               

               Cow position:
               chr8:30069802-30069665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               123
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               772-904
               

               Cow position:
               chr8:30069146-30069014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               124
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               904-1030
               

               Cow position:
               chr8:30067489-30067363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1115-1233
               

               Cow position:
               chr8:30067338-30067221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 55
               
Show alignments to all cow chromosomes.