Cow genome map
| Conread name: | Ss1.1-Ova1-OVR010018E08.5 |
| Conread position: | 114-212 |
| Cow position: | chr1:52670768-52670866 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 209-330 |
| Cow position: | chr1:52690697-52690816 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 98, 75 |
| Conread position: | 283-441 |
| Cow position: | chr1:52691198-52691355 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 432-525 |
| Cow position: | chr1:52691579-52691672 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 525-642 |
| Cow position: | chr1:52692317-52692434 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 114 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 643-813 |
| Cow position: | chr1:52693730-52693900 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 812-922 |
| Cow position: | chr1:52695362-52695471 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 892-1003 |
| Cow position: | chr1:52699086-52699197 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1003-1090 |
| Cow position: | chr1:52705503-52705590 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1147-1217 |
| Cow position: | chr1:52706990-52707060 (view UCSC Genome Browser custom track) |
| Alignm length: | 71 |
| Alignm identity: | 70 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1210-1414 |
| Cow position: | chr1:52711835-52712039 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1399-1616 |
| Cow position: | chr1:52713731-52713948 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1614-1704 |
| Cow position: | chr1:52719037-52719127 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1707-2124 |
| Cow position: | chr1:52719038-52719451 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 0 |
Show alignments to all cow chromosomes.