Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10057F12.5 |
| Conread position: | 641-817 |
| Cow position: | chr1:39251328-39251510 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 645-836 |
| Cow position: | chr1:61242073-61242262 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 163, 9 |
| Conread position: | 653-776 |
| Cow position: | chr1:37465660-37465536 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 82 |
| Conread position: | 653-806 |
| Cow position: | chr1:92550756-92550605 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 653-813 |
| Cow position: | chr1:65155416-65155258 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 52, 68 |
| Conread position: | 653-814 |
| Cow position: | chr1:62041744-62041893 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 155, 33 |
| Conread position: | 653-817 |
| Cow position: | chr1:85594-85756 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 155, 65 |
| Conread position: | 653-817 |
| Cow position: | chr1:34892929-34893096 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 653-817 |
| Cow position: | chr1:40420098-40419934 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 653-817 |
| Cow position: | chr1:41092809-41092650 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 53, 31 |
| Conread position: | 653-817 |
| Cow position: | chr1:49728240-49728402 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 52, 76 |
| Conread position: | 653-817 |
| Cow position: | chr1:52207353-52207509 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 139, 53 |
| Conread position: | 653-817 |
| Cow position: | chr1:71555447-71555278 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 35, 71 |
| Conread position: | 653-817 |
| Cow position: | chr1:77755360-77755190 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 653-817 |
| Cow position: | chr1:85409506-85409345 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 49, 66 |
| Conread position: | 653-817 |
| Cow position: | chr1:88017474-88017310 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 49, 66 |
| Conread position: | 653-817 |
| Cow position: | chr1:100132234-100132402 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 653-817 |
| Cow position: | chr1:101883974-101884133 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 49, 64 |
| Conread position: | 653-826 |
| Cow position: | chr1:82387291-82387464 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 49, 86 |
| Conread position: | 653-836 |
| Cow position: | chr1:64745388-64745209 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 49, 65 |
| Conread position: | 654-806 |
| Cow position: | chr1:74713823-74713964 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 654-817 |
| Cow position: | chr1:22072010-22072165 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 654-817 |
| Cow position: | chr1:82572880-82572720 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 656-806 |
| Cow position: | chr1:6866048-6865901 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 63 |
| Conread position: | 657-782 |
| Cow position: | chr1:87914591-87914470 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 659-817 |
| Cow position: | chr1:8726342-8726186 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 662-817 |
| Cow position: | chr1:64098915-64098759 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 668-822 |
| Cow position: | chr1:28408136-28407988 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 683-817 |
| Cow position: | chr1:68332809-68332676 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 125, 27 |
| Conread position: | 684-817 |
| Cow position: | chr1:80329564-80329429 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 684-832 |
| Cow position: | chr1:59910969-59911117 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 689-817 |
| Cow position: | chr1:3746498-3746622 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 13, 31 |
| Conread position: | 719-817 |
| Cow position: | chr1:71086152-71086250 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 89, 70 |
Show alignments to all cow chromosomes.