Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10057F12.5 |
| Conread position: | 653-789 |
| Cow position: | chr11:25856539-25856669 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 653-804 |
| Cow position: | chr11:55283182-55283025 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 109 |
| Conread position: | 653-804 |
| Cow position: | chr11:60511732-60511581 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 56 |
| Conread position: | 653-813 |
| Cow position: | chr11:44064228-44064389 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 53, 68 |
| Conread position: | 653-815 |
| Cow position: | chr11:77772343-77772192 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 155, 40 |
| Conread position: | 653-816 |
| Cow position: | chr11:70605727-70605885 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-817 |
| Cow position: | chr11:8087810-8087655 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 155, 65 |
| Conread position: | 653-817 |
| Cow position: | chr11:15885646-15885805 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 155, 31 |
| Conread position: | 653-817 |
| Cow position: | chr11:19567387-19567546 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 52, 27 |
| Conread position: | 653-817 |
| Cow position: | chr11:22851387-22851549 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-817 |
| Cow position: | chr11:24008443-24008609 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 51, 69 |
| Conread position: | 653-817 |
| Cow position: | chr11:25807390-25807229 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 49, 66 |
| Conread position: | 653-817 |
| Cow position: | chr11:27817168-27817009 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 653-817 |
| Cow position: | chr11:29785462-29785622 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 152, 57 |
| Conread position: | 653-817 |
| Cow position: | chr11:54204476-54204320 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 653-817 |
| Cow position: | chr11:57062211-57062369 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 653-817 |
| Cow position: | chr11:57153316-57153152 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 653-817 |
| Cow position: | chr11:74171263-74171107 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 155, 31 |
| Conread position: | 653-817 |
| Cow position: | chr11:77756415-77756249 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 70, 57 |
| Conread position: | 653-817 |
| Cow position: | chr11:82529205-82529372 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 653-823 |
| Cow position: | chr11:21909788-21909615 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 31 |
| Conread position: | 653-823 |
| Cow position: | chr11:35251639-35251477 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 153, 65 |
| Conread position: | 653-854 |
| Cow position: | chr11:10877600-10877798 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 155, 71 |
| Conread position: | 654-787 |
| Cow position: | chr11:12065058-12065184 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 33 |
| Conread position: | 654-797 |
| Cow position: | chr11:43855882-43855738 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 8 |
| Conread position: | 654-815 |
| Cow position: | chr11:1774541-1774380 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 24, 64 |
| Conread position: | 654-817 |
| Cow position: | chr11:34303816-34303973 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 655-817 |
| Cow position: | chr11:55119817-55119975 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 655-817 |
| Cow position: | chr11:64101395-64101559 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 657-817 |
| Cow position: | chr11:40574421-40574265 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 45, 63 |
| Conread position: | 701-812 |
| Cow position: | chr11:9295237-9295128 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 107, 17 |
Show alignments to all cow chromosomes.