Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10057F12.5 |
| Conread position: | 645-815 |
| Cow position: | chr13:38535030-38534868 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 653-806 |
| Cow position: | chr13:12213844-12214000 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 653-816 |
| Cow position: | chr13:25955255-25955091 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-816 |
| Cow position: | chr13:28605786-28605948 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 52, 68 |
| Conread position: | 653-817 |
| Cow position: | chr13:9103245-9103087 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-817 |
| Cow position: | chr13:17169567-17169722 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 653-817 |
| Cow position: | chr13:22193781-22193939 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 49, 32 |
| Conread position: | 653-817 |
| Cow position: | chr13:24404003-24403841 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 42, 68 |
| Conread position: | 653-817 |
| Cow position: | chr13:38361925-38361764 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 653-817 |
| Cow position: | chr13:43385166-43385324 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 155, 57 |
| Conread position: | 653-817 |
| Cow position: | chr13:47325520-47325366 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 653-817 |
| Cow position: | chr13:48580616-48580460 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 155, 65 |
| Conread position: | 653-818 |
| Cow position: | chr13:18596992-18596831 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 49, 68 |
| Conread position: | 653-821 |
| Cow position: | chr13:51142639-51142481 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 155, 23 |
| Conread position: | 653-823 |
| Cow position: | chr13:19115784-19115949 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 155, 57 |
| Conread position: | 653-823 |
| Cow position: | chr13:34264725-34264566 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 155, 65 |
| Conread position: | 653-846 |
| Cow position: | chr13:51241095-51241291 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 654-813 |
| Cow position: | chr13:34885348-34885508 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 67, 56 |
| Conread position: | 654-815 |
| Cow position: | chr13:4796201-4796360 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 154, 56 |
| Conread position: | 654-817 |
| Cow position: | chr13:2416419-2416579 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 31 |
| Conread position: | 654-817 |
| Cow position: | chr13:6921223-6921064 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 153, 30 |
| Conread position: | 654-817 |
| Cow position: | chr13:22984824-22984988 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 66 |
| Conread position: | 655-817 |
| Cow position: | chr13:14080076-14079913 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 48, 74 |
| Conread position: | 658-823 |
| Cow position: | chr13:18839444-18839608 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 154, 60 |
| Conread position: | 659-817 |
| Cow position: | chr13:55407039-55407196 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 43, 69 |
| Conread position: | 663-817 |
| Cow position: | chr13:44144025-44143876 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 668-817 |
| Cow position: | chr13:10854632-10854484 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 668-823 |
| Cow position: | chr13:14708753-14708912 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 20 |
| Conread position: | 683-817 |
| Cow position: | chr13:46464425-46464291 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 689-817 |
| Cow position: | chr13:15489927-15490054 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 13, 30 |
Show alignments to all cow chromosomes.