Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10057F12.5 |
| Conread position: | 653-803 |
| Cow position: | chr3:47497852-47497996 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 653-806 |
| Cow position: | chr3:64081800-64081947 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 65 |
| Conread position: | 653-814 |
| Cow position: | chr3:78442554-78442394 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 52, 67 |
| Conread position: | 653-815 |
| Cow position: | chr3:13526962-13527116 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-817 |
| Cow position: | chr3:2285023-2285182 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 154, 39 |
| Conread position: | 653-817 |
| Cow position: | chr3:17519456-17519299 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 653-817 |
| Cow position: | chr3:26581741-26581576 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 73, 80 |
| Conread position: | 653-817 |
| Cow position: | chr3:27633676-27633509 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 653-817 |
| Cow position: | chr3:43004471-43004307 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 653-817 |
| Cow position: | chr3:60947858-60947702 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 653-817 |
| Cow position: | chr3:74724107-74723943 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 142 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 154, 65 |
| Conread position: | 653-817 |
| Cow position: | chr3:79315515-79315678 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-818 |
| Cow position: | chr3:24532152-24532317 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 653-823 |
| Cow position: | chr3:1549645-1549817 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 133 |
| Conread position: | 653-823 |
| Cow position: | chr3:60854510-60854339 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 51, 83 |
| Conread position: | 653-823 |
| Cow position: | chr3:63334374-63334208 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 73, 32 |
| Conread position: | 653-832 |
| Cow position: | chr3:23478565-23478738 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 653-836 |
| Cow position: | chr3:12531785-12531601 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-836 |
| Cow position: | chr3:73154294-73154465 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 654-806 |
| Cow position: | chr3:32773528-32773679 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 67 |
| Conread position: | 654-806 |
| Cow position: | chr3:43967077-43966932 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 654-832 |
| Cow position: | chr3:77468290-77468466 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 48, 33 |
| Conread position: | 656-817 |
| Cow position: | chr3:1339241-1339397 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 657-815 |
| Cow position: | chr3:73418391-73418547 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 151, 40 |
| Conread position: | 666-817 |
| Cow position: | chr3:31286554-31286407 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 671-817 |
| Cow position: | chr3:27879577-27879433 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 63 |
Show alignments to all cow chromosomes.