Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10057F12.5 |
| Conread position: | 652-817 |
| Cow position: | chr4:54347553-54347716 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 156, 73 |
| Conread position: | 653-792 |
| Cow position: | chr4:24713305-24713166 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 52, 67 |
| Conread position: | 653-806 |
| Cow position: | chr4:2443545-2443393 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 653-806 |
| Cow position: | chr4:20925661-20925516 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 653-811 |
| Cow position: | chr4:51905622-51905778 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 52, 67 |
| Conread position: | 653-817 |
| Cow position: | chr4:5188655-5188497 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 155, 35 |
| Conread position: | 653-817 |
| Cow position: | chr4:21162999-21163161 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 653-817 |
| Cow position: | chr4:25924607-25924452 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 65 |
| Conread position: | 653-817 |
| Cow position: | chr4:31003005-31002844 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 653-817 |
| Cow position: | chr4:34043267-34043090 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 653-817 |
| Cow position: | chr4:47511379-47511541 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 49, 61 |
| Conread position: | 653-817 |
| Cow position: | chr4:49741913-49742075 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 653-817 |
| Cow position: | chr4:57565867-57565707 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-817 |
| Cow position: | chr4:57652562-57652722 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 653-817 |
| Cow position: | chr4:58856157-58855998 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 653-820 |
| Cow position: | chr4:4192552-4192714 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 155, 15 |
| Conread position: | 653-823 |
| Cow position: | chr4:22507028-22506862 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 653-832 |
| Cow position: | chr4:52597200-52597026 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 654-817 |
| Cow position: | chr4:36759632-36759797 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 67 |
| Conread position: | 654-817 |
| Cow position: | chr4:58432616-58432454 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 50, 5 |
| Conread position: | 654-822 |
| Cow position: | chr4:6629970-6629809 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 655-823 |
| Cow position: | chr4:68107006-68106841 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 656-817 |
| Cow position: | chr4:57221867-57221705 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 658-817 |
| Cow position: | chr4:27444403-27444562 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 62 |
| Conread position: | 664-785 |
| Cow position: | chr4:32749837-32749954 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 90, 16 |
| Conread position: | 664-826 |
| Cow position: | chr4:59809588-59809432 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 56 |
| Conread position: | 665-817 |
| Cow position: | chr4:4029191-4029342 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 143, 80 |
| Conread position: | 665-817 |
| Cow position: | chr4:49881628-49881476 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 694-836 |
| Cow position: | chr4:4519537-4519682 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 34 |
Show alignments to all cow chromosomes.