Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10057F12.5 |
| Conread position: | 636-817 |
| Cow position: | chr6:11159615-11159435 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 647-795 |
| Cow position: | chr6:62327937-62328080 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 7 |
| Conread position: | 653-803 |
| Cow position: | chr6:1077020-1076870 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 653-809 |
| Cow position: | chr6:812007-811850 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 81 |
| Conread position: | 653-816 |
| Cow position: | chr6:34556910-34557068 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 51, 28 |
| Conread position: | 653-817 |
| Cow position: | chr6:3017869-3018028 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 22 |
| Conread position: | 653-817 |
| Cow position: | chr6:5500666-5500503 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 65, 44 |
| Conread position: | 653-817 |
| Cow position: | chr6:14280053-14280219 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 81 |
| Conread position: | 653-817 |
| Cow position: | chr6:27711029-27711196 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-817 |
| Cow position: | chr6:31687789-31687633 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 155, 54 |
| Conread position: | 653-817 |
| Cow position: | chr6:35698016-35697858 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 653-817 |
| Cow position: | chr6:40241086-40241243 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 49, 66 |
| Conread position: | 653-817 |
| Cow position: | chr6:41157626-41157783 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 155, 65 |
| Conread position: | 653-817 |
| Cow position: | chr6:41557882-41558043 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-817 |
| Cow position: | chr6:50501996-50502154 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-821 |
| Cow position: | chr6:20332709-20332882 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 28, 68 |
| Conread position: | 653-823 |
| Cow position: | chr6:6722543-6722718 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 83 |
| Conread position: | 653-823 |
| Cow position: | chr6:32428842-32429002 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 653-823 |
| Cow position: | chr6:44377668-44377842 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 653-836 |
| Cow position: | chr6:6635543-6635722 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 155, 37 |
| Conread position: | 653-844 |
| Cow position: | chr6:3374024-3373829 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 65 |
| Conread position: | 654-836 |
| Cow position: | chr6:29078133-29078308 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 48, 8 |
| Conread position: | 655-817 |
| Cow position: | chr6:35126704-35126554 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 47, 29 |
| Conread position: | 655-818 |
| Cow position: | chr6:62754089-62753927 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 47, 84 |
| Conread position: | 659-836 |
| Cow position: | chr6:37085297-37085474 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 667-821 |
| Cow position: | chr6:39917580-39917734 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 668-767 |
| Cow position: | chr6:12808817-12808720 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 668-817 |
| Cow position: | chr6:53416543-53416396 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 53 |
| Conread position: | 677-817 |
| Cow position: | chr6:1940074-1939930 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 43 |
| Conread position: | 678-846 |
| Cow position: | chr6:58593721-58593554 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 19 |
Show alignments to all cow chromosomes.