Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10057F12.5 |
| Conread position: | 651-817 |
| Cow position: | chr9:2638653-2638816 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 652-817 |
| Cow position: | chr9:41318317-41318482 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 74, 65 |
| Conread position: | 653-806 |
| Cow position: | chr9:4985701-4985850 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 653-811 |
| Cow position: | chr9:53597140-53597303 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 653-813 |
| Cow position: | chr9:19835725-19835880 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 49, 6 |
| Conread position: | 653-815 |
| Cow position: | chr9:13072028-13071870 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 53, 67 |
| Conread position: | 653-816 |
| Cow position: | chr9:1527134-1527294 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 653-817 |
| Cow position: | chr9:4834643-4834492 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 155, 9 |
| Conread position: | 653-817 |
| Cow position: | chr9:12183390-12183227 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 49, 68 |
| Conread position: | 653-817 |
| Cow position: | chr9:18570722-18570881 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-817 |
| Cow position: | chr9:34763188-34763352 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 53, 67 |
| Conread position: | 653-817 |
| Cow position: | chr9:45140559-45140395 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 53, 67 |
| Conread position: | 653-846 |
| Cow position: | chr9:22376928-22376734 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 654-805 |
| Cow position: | chr9:15282838-15282688 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 66 |
| Conread position: | 655-817 |
| Cow position: | chr9:15855377-15855531 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 658-802 |
| Cow position: | chr9:64606072-64606214 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 659-800 |
| Cow position: | chr9:12565046-12564914 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 663-817 |
| Cow position: | chr9:6557480-6557328 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 39, 58 |
| Conread position: | 663-817 |
| Cow position: | chr9:8234261-8234117 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 145, 63 |
| Conread position: | 664-832 |
| Cow position: | chr9:58125835-58125670 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 41, 25 |
| Conread position: | 665-817 |
| Cow position: | chr9:19081946-19082093 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 68 |
| Conread position: | 668-817 |
| Cow position: | chr9:39994111-39994257 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 669-817 |
| Cow position: | chr9:12199261-12199405 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 139, 23 |
| Conread position: | 672-804 |
| Cow position: | chr9:18566768-18566898 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 682-813 |
| Cow position: | chr9:59114089-59113953 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 690-818 |
| Cow position: | chr9:40923021-40923149 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 12, 37 |
Show alignments to all cow chromosomes.