Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10057F12.5 |
| Conread position: | 643-817 |
| Cow position: | chrX:6672159-6672329 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 652-806 |
| Cow position: | chrX:5956945-5956798 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 50, 85 |
| Conread position: | 653-780 |
| Cow position: | chrX:25106613-25106738 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 49, 75 |
| Conread position: | 653-786 |
| Cow position: | chrX:4597327-4597192 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-806 |
| Cow position: | chrX:43647365-43647215 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 6 |
| Conread position: | 653-810 |
| Cow position: | chrX:18814558-18814711 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 653-816 |
| Cow position: | chrX:19127245-19127086 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 127, 34 |
| Conread position: | 653-817 |
| Cow position: | chrX:956875-957039 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 52, 31 |
| Conread position: | 653-817 |
| Cow position: | chrX:1330406-1330248 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 155, 31 |
| Conread position: | 653-817 |
| Cow position: | chrX:2700718-2700556 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 75 |
| Conread position: | 653-817 |
| Cow position: | chrX:11675461-11675622 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-817 |
| Cow position: | chrX:13403355-13403196 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 653-817 |
| Cow position: | chrX:19017853-19017684 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 82 |
| Conread position: | 653-817 |
| Cow position: | chrX:20505098-20505256 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 653-817 |
| Cow position: | chrX:21885719-21885551 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 49, 137 |
| Conread position: | 653-817 |
| Cow position: | chrX:27458342-27458182 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 75 |
| Conread position: | 653-817 |
| Cow position: | chrX:40353698-40353862 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 653-819 |
| Cow position: | chrX:24951979-24951818 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 147, 65 |
| Conread position: | 653-820 |
| Cow position: | chrX:4630984-4630822 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 51, 39 |
| Conread position: | 653-823 |
| Cow position: | chrX:37956951-37957124 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 653-836 |
| Cow position: | chrX:2147708-2147881 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 653-836 |
| Cow position: | chrX:9910362-9910193 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 653-836 |
| Cow position: | chrX:37980778-37980953 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 155, 38 |
| Conread position: | 653-839 |
| Cow position: | chrX:20957958-20958154 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 655-806 |
| Cow position: | chrX:37236398-37236540 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 10 |
| Conread position: | 655-817 |
| Cow position: | chrX:4440240-4440403 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 655-817 |
| Cow position: | chrX:4625299-4625463 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 65 |
| Conread position: | 655-817 |
| Cow position: | chrX:6472101-6472260 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 152, 63 |
| Conread position: | 657-817 |
| Cow position: | chrX:12688686-12688522 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 27 |
| Conread position: | 658-805 |
| Cow position: | chrX:2186650-2186793 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 23 |
| Conread position: | 659-816 |
| Cow position: | chrX:4590345-4590498 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 660-817 |
| Cow position: | chrX:4948101-4947948 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 59, 50 |
| Conread position: | 664-817 |
| Cow position: | chrX:18518440-18518586 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 669-822 |
| Cow position: | chrX:11982997-11983145 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 672-823 |
| Cow position: | chrX:16817058-16817204 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 30, 48 |
| Conread position: | 684-823 |
| Cow position: | chrX:40350322-40350459 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 686-817 |
| Cow position: | chrX:1427692-1427825 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 34 |
Show alignments to all cow chromosomes.