Cow genome map

Conread name: Ss1.1-Ova1-OVRM10069H08.5

Conread position: 1-111
Cow position:
Alignm length: 113
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 80

Conread position: 1-118
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 41, 18

Conread position: 1-139
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 14

Conread position: 1-142
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 17

Conread position: 1-144
Cow position:
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 43, 17

Conread position: 1-150
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 41, 20

Conread position: 1-151
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 39, 17

Conread position: 1-154
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 17

Conread position: 1-170
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 17

Conread position: 1-185
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 41, 17

Conread position: 1-190
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 17

Conread position: 1-199
Cow position:
Alignm length: 204
Alignm identity: 154
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 41, 18

Conread position: 1-219
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 117

Conread position: 1-225
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 17

Conread position: 1-230
Cow position:
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 1-245
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 18

Conread position: 1-247
Cow position:
Alignm length: 256
Alignm identity: 184
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 17

Conread position: 1-248
Cow position:
Alignm length: 249
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 22

Conread position: 1-249
Cow position:
Alignm length: 256
Alignm identity: 199
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 64, 17

Conread position: 1-262
Cow position:
Alignm length: 271
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 42, 20

Conread position: 1-267
Cow position:
Alignm length: 272
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 17

Conread position: 1-267
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 20

Conread position: 1-271
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 40, 18

Conread position: 1-271
Cow position:
Alignm length: 277
Alignm identity: 208
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 64, 17

Conread position: 1-275
Cow position:
Alignm length: 281
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 18

Conread position: 1-275
Cow position:
Alignm length: 278
Alignm identity: 201
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 64, 18

Conread position: 1-276
Cow position:
Alignm length: 288
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 15

Conread position: 1-279
Cow position:
Alignm length: 288
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 41, 17

Conread position: 1-279
Cow position:
Alignm length: 285
Alignm identity: 193
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 17

Conread position: 1-279
Cow position:
Alignm length: 283
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 17

Conread position: 1-279
Cow position:
Alignm length: 288
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 17

Conread position: 1-279
Cow position:
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 1-280
Cow position:
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 18

Conread position: 1-280
Cow position:
Alignm length: 289
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 17

Conread position: 1-285
Cow position:
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 1-286
Cow position:
Alignm length: 288
Alignm identity: 206
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 17

Conread position: 1-288
Cow position:
Alignm length: 301
Alignm identity: 204
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 18

Conread position: 1-288
Cow position:
Alignm length: 300
Alignm identity: 216
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 41, 17

Conread position: 1-288
Cow position:
Alignm length: 294
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 17

Conread position: 1-288
Cow position:
Alignm length: 296
Alignm identity: 213
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 18

Conread position: 1-288
Cow position:
Alignm length: 307
Alignm identity: 224
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 17

Conread position: 1-288
Cow position:
Alignm length: 296
Alignm identity: 217
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 41, 20

Conread position: 1-289
Cow position:
Alignm length: 297
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 1-289
Cow position:
Alignm length: 295
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 15

Conread position: 1-289
Cow position:
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 17

Conread position: 1-289
Cow position:
Alignm length: 301
Alignm identity: 223
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 41, 18

Conread position: 1-289
Cow position:
Alignm length: 299
Alignm identity: 219
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 18

Conread position: 1-289
Cow position:
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 1-289
Cow position:
Alignm length: 300
Alignm identity: 218
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 21

Conread position: 1-289
Cow position:
Alignm length: 300
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 1-289
Cow position:
Alignm length: 292
Alignm identity: 212
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 66, 11

Conread position: 1-289
Cow position:
Alignm length: 300
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 1-289
Cow position:
Alignm length: 301
Alignm identity: 221
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 41, 14

Conread position: 1-289
Cow position:
Alignm length: 301
Alignm identity: 223
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 64, 21

Conread position: 2-214
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 16

Conread position: 2-275
Cow position:
Alignm length: 284
Alignm identity: 211
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 40, 10

Conread position: 2-275
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 14, 77

Conread position: 2-275
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 16

Conread position: 2-279
Cow position:
Alignm length: 285
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 16

Conread position: 2-279
Cow position:
Alignm length: 288
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 17

Conread position: 2-288
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 40, 16

Conread position: 2-288
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 16

Conread position: 2-289
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 41, 16

Conread position: 2-289
Cow position:
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 16

Conread position: 2-294
Cow position:
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 17

Conread position: 3-123
Cow position:
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 14

Conread position: 3-154
Cow position:
Alignm length: 154
Alignm identity: 123
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 39, 15

Conread position: 3-199
Cow position:
Alignm length: 201
Alignm identity: 160
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 9

Conread position: 3-207
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 12

Conread position: 3-239
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 19

Conread position: 3-249
Cow position:
Alignm length: 260
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 38

Conread position: 3-262
Cow position:
Alignm length: 263
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 15

Conread position: 3-266
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 176, 16

Conread position: 3-273
Cow position:
Alignm length: 277
Alignm identity: 210
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 39, 9

Conread position: 3-275
Cow position:
Alignm length: 288
Alignm identity: 213
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 39, 20

Conread position: 3-275
Cow position:
Alignm length: 283
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 3-276
Cow position:
Alignm length: 278
Alignm identity: 200
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 39, 16

Conread position: 3-279
Cow position:
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 3-287
Cow position:
Alignm length: 289
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 16

Conread position: 3-288
Cow position:
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 16

Conread position: 3-289
Cow position:
Alignm length: 296
Alignm identity: 214
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 42, 16

Conread position: 3-289
Cow position:
Alignm length: 295
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 3-298
Cow position:
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 4-176
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 38, 15

Conread position: 4-279
Cow position:
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 11

Conread position: 4-284
Cow position:
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 15

Conread position: 4-286
Cow position:
Alignm length: 292
Alignm identity: 212
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 14

Conread position: 7-275
Cow position:
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 11

Conread position: 12-175
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 30, 156

Conread position: 12-248
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 14-288
Cow position:
Alignm length: 287
Alignm identity: 191
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 28, 249

Conread position: 15-273
Cow position:
Alignm length: 265
Alignm identity: 191
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 72, 39

Conread position: 15-286
Cow position:
Alignm length: 279
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 23

Conread position: 15-288
Cow position:
Alignm length: 284
Alignm identity: 214
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 65

Conread position: 15-289
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 27, 175

Conread position: 16-260
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 66

Conread position: 17-289
Cow position:
Alignm length: 278
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 168

Conread position: 18-236
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 111

Conread position: 21-279
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 18

Conread position: 21-289
Cow position:
Alignm length: 282
Alignm identity: 191
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 67

Conread position: 22-243
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 69

Conread position: 22-290
Cow position:
Alignm length: 281
Alignm identity: 189
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 183

Conread position: 24-287
Cow position:
Alignm length: 272
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 15

Conread position: 25-289
Cow position:
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 77

Conread position: 26-279
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 17, 54

Conread position: 39-266
Cow position:
Alignm length: 231
Alignm identity: 178
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 26, 99

Conread position: 39-275
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 26, 87

Conread position: 39-276
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 52

Conread position: 43-276
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 99, 119

Conread position: 58-276
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 14

Conread position: 64-276
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 62

Conread position: 65-273
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 95

Conread position: 66-288
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 23, 142

Conread position: 70-288
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 108

Conread position: 73-274
Cow position:
Alignm length: 205
Alignm identity: 156
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 106, 182

Conread position: 73-289
Cow position:
Alignm length: 226
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 132

Conread position: 82-265
Cow position:
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 79

Conread position: 82-275
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 174

Conread position: 86-202
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 94-290
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 11, 102

Conread position: 96-289
Cow position:
Alignm length: 198
Alignm identity: 157
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 83, 24

Conread position: 104-275
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 38, 16

Conread position: 107-279
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 99

Conread position: 108-279
Cow position:
Alignm length: 173
Alignm identity: 132
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 119, 18

Conread position: 129-288
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 77

Conread position: 131-279
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 44

Conread position: 137-276
Cow position:
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 76

Conread position: 142-289
Cow position:
Alignm length: 151
Alignm identity: 124
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 39, 54

Show alignments to all cow chromosomes.