Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10069H08.5 |
| Conread position: | 1-111 |
| Cow position: | chr1:80897777-80897888 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 80 |
| Conread position: | 1-118 |
| Cow position: | chr1:80384643-80384764 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-139 |
| Cow position: | chr1:5347180-5347041 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 1-142 |
| Cow position: | chr1:75183631-75183771 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 1-144 |
| Cow position: | chr1:26424642-26424786 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 1-150 |
| Cow position: | chr1:53920707-53920559 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 1-151 |
| Cow position: | chr1:54289071-54289226 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 1-154 |
| Cow position: | chr1:70236146-70236297 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-170 |
| Cow position: | chr1:36613969-36614138 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-185 |
| Cow position: | chr1:45479471-45479653 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-190 |
| Cow position: | chr1:54217136-54216943 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-199 |
| Cow position: | chr1:76170322-76170128 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-219 |
| Cow position: | chr1:46311254-46311025 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 117 |
| Conread position: | 1-225 |
| Cow position: | chr1:4788654-4788429 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-230 |
| Cow position: | chr1:50634140-50634370 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-245 |
| Cow position: | chr1:26531461-26531705 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-247 |
| Cow position: | chr1:72732161-72731910 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-248 |
| Cow position: | chr1:51904220-51904455 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 1-249 |
| Cow position: | chr1:44746980-44746735 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-262 |
| Cow position: | chr1:50045921-50045657 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 1-267 |
| Cow position: | chr1:46205931-46205670 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 1-267 |
| Cow position: | chr1:82378911-82378641 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 1-271 |
| Cow position: | chr1:31390467-31390740 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 1-271 |
| Cow position: | chr1:76096553-76096290 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-275 |
| Cow position: | chr1:25184231-25183976 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-275 |
| Cow position: | chr1:31189993-31190263 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 1-276 |
| Cow position: | chr1:74946998-74947279 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 1-279 |
| Cow position: | chr1:50345666-50345387 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-279 |
| Cow position: | chr1:63504453-63504179 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 1-279 |
| Cow position: | chr1:69004511-69004237 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-279 |
| Cow position: | chr1:69415590-69415873 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-279 |
| Cow position: | chr1:75347745-75347461 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-280 |
| Cow position: | chr1:29916532-29916246 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 1-280 |
| Cow position: | chr1:64189621-64189339 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-285 |
| Cow position: | chr1:101772020-101771743 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-286 |
| Cow position: | chr1:97622100-97622364 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-288 |
| Cow position: | chr1:20099486-20099195 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 1-288 |
| Cow position: | chr1:22777423-22777718 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-288 |
| Cow position: | chr1:58825662-58825380 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-288 |
| Cow position: | chr1:78750579-78750859 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-288 |
| Cow position: | chr1:81162134-81161843 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-288 |
| Cow position: | chr1:89443358-89443645 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 1-289 |
| Cow position: | chr1:5278294-5278586 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-289 |
| Cow position: | chr1:8192615-8192899 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 1-289 |
| Cow position: | chr1:13195313-13195594 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 1-289 |
| Cow position: | chr1:28678643-28678356 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-289 |
| Cow position: | chr1:51257136-51256860 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 1-289 |
| Cow position: | chr1:61737216-61736932 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-289 |
| Cow position: | chr1:65665172-65664893 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-289 |
| Cow position: | chr1:80973488-80973783 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | chr1:85783633-85783356 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 1-289 |
| Cow position: | chr1:90422962-90423255 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | chr1:94526617-94526325 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 1-289 |
| Cow position: | chr1:95467218-95467510 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 2-214 |
| Cow position: | chr1:48083847-48083629 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 2-275 |
| Cow position: | chr1:21934064-21934331 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 40, 10 |
| Conread position: | 2-275 |
| Cow position: | chr1:46839727-46839443 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 2-275 |
| Cow position: | chr1:66355595-66355868 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 2-279 |
| Cow position: | chr1:5161934-5162209 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 2-279 |
| Cow position: | chr1:92010431-92010158 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 2-288 |
| Cow position: | chr1:40388750-40389029 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 2-288 |
| Cow position: | chr1:62732689-62732407 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 2-289 |
| Cow position: | chr1:56643485-56643758 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 2-289 |
| Cow position: | chr1:85411697-85411410 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 2-294 |
| Cow position: | chr1:2998067-2997769 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 3-123 |
| Cow position: | chr1:6130617-6130738 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 3-154 |
| Cow position: | chr1:97603520-97603669 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-199 |
| Cow position: | chr1:73653524-73653722 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 3-207 |
| Cow position: | chr1:30066740-30066529 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 3-239 |
| Cow position: | chr1:75998349-75998577 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 3-249 |
| Cow position: | chr1:77118411-77118664 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 3-262 |
| Cow position: | chr1:6734570-6734322 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 3-266 |
| Cow position: | chr1:38692774-38692517 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 176, 16 |
| Conread position: | 3-273 |
| Cow position: | chr1:3657247-3657513 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 210 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 3-275 |
| Cow position: | chr1:35843808-35844083 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 3-275 |
| Cow position: | chr1:41735501-41735776 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-276 |
| Cow position: | chr1:52449503-52449764 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-279 |
| Cow position: | chr1:31871549-31871265 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 20 |
| Conread position: | 3-287 |
| Cow position: | chr1:4441003-4441273 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-288 |
| Cow position: | chr1:71136271-71135984 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-289 |
| Cow position: | chr1:58889177-58889465 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 3-289 |
| Cow position: | chr1:89548305-89548020 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-298 |
| Cow position: | chr1:26688354-26688654 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 4-176 |
| Cow position: | chr1:62713838-62714008 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 4-279 |
| Cow position: | chr1:30413708-30413432 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 4-284 |
| Cow position: | chr1:90413493-90413215 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 15 |
| Conread position: | 4-286 |
| Cow position: | chr1:10719362-10719648 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 212 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 7-275 |
| Cow position: | chr1:6794811-6795085 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 12-175 |
| Cow position: | chr1:4451163-4451328 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 30, 156 |
| Conread position: | 12-248 |
| Cow position: | chr1:2765525-2765282 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 14-288 |
| Cow position: | chr1:59650380-59650095 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 28, 249 |
| Conread position: | 15-273 |
| Cow position: | chr1:78791200-78791457 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 15-286 |
| Cow position: | chr1:15691440-15691171 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 15-288 |
| Cow position: | chr1:70533830-70534102 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 27, 65 |
| Conread position: | 15-289 |
| Cow position: | chr1:80764427-80764704 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 27, 175 |
| Conread position: | 16-260 |
| Cow position: | chr1:80856431-80856189 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 17-289 |
| Cow position: | chr1:57783111-57782840 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 168 |
| Conread position: | 18-236 |
| Cow position: | chr1:28944617-28944399 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 111 |
| Conread position: | 21-279 |
| Cow position: | chr1:15308136-15307879 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 21-289 |
| Cow position: | chr1:42174485-42174758 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 22-243 |
| Cow position: | chr1:57536934-57537155 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 20, 69 |
| Conread position: | 22-290 |
| Cow position: | chr1:73196126-73196401 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 183 |
| Conread position: | 24-287 |
| Cow position: | chr1:29975503-29975765 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 42, 15 |
| Conread position: | 25-289 |
| Cow position: | chr1:7142752-7143018 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 26-279 |
| Cow position: | chr1:84015969-84015716 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 17, 54 |
| Conread position: | 39-266 |
| Cow position: | chr1:29657904-29657681 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 39-275 |
| Cow position: | chr1:92642365-92642598 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 39-276 |
| Cow position: | chr1:39026122-39025882 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 43-276 |
| Cow position: | chr1:7731805-7731569 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 99, 119 |
| Conread position: | 58-276 |
| Cow position: | chr1:49131049-49131274 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 64-276 |
| Cow position: | chr1:81301034-81301251 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 65-273 |
| Cow position: | chr1:7609676-7609461 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 66-288 |
| Cow position: | chr1:8869604-8869828 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 23, 142 |
| Conread position: | 70-288 |
| Cow position: | chr1:35170385-35170168 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 70, 108 |
| Conread position: | 73-274 |
| Cow position: | chr1:765520-765723 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 106, 182 |
| Conread position: | 73-289 |
| Cow position: | chr1:32244351-32244574 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 71, 132 |
| Conread position: | 82-265 |
| Cow position: | chr1:85596008-85596196 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 79 |
| Conread position: | 82-275 |
| Cow position: | chr1:99807681-99807879 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 174 |
| Conread position: | 86-202 |
| Cow position: | chr1:87148896-87148777 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 94-290 |
| Cow position: | chr1:14528168-14528365 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 96-289 |
| Cow position: | chr1:101812253-101812448 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 83, 24 |
| Conread position: | 104-275 |
| Cow position: | chr1:9443833-9444001 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 107-279 |
| Cow position: | chr1:63362846-63363012 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 99 |
| Conread position: | 108-279 |
| Cow position: | chr1:56408628-56408458 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 119, 18 |
| Conread position: | 129-288 |
| Cow position: | chr1:20422214-20422374 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 77 |
| Conread position: | 131-279 |
| Cow position: | chr1:20521702-20521847 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 44 |
| Conread position: | 137-276 |
| Cow position: | chr1:97786163-97786025 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 95, 76 |
| Conread position: | 142-289 |
| Cow position: | chr1:51836548-51836402 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 39, 54 |
Show alignments to all cow chromosomes.