Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10069H08.5 |
| Conread position: | 1-105 |
| Cow position: | |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-144 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-152 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-152 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 1-185 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-199 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-212 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-215 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-230 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 1-235 |
| Cow position: | |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-249 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 1-260 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-265 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 1-267 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 1-267 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 1-274 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-276 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 18 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 78, 18 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 1-290 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 2-149 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 2-199 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 2-244 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 2-249 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 2-275 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 2-275 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 2-287 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 2-287 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 64, 10 |
| Conread position: | 2-289 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 2-289 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 2-290 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 3-199 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 3-207 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 3-244 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 40, 9 |
| Conread position: | 3-247 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 3-248 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-275 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-276 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-283 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 121 |
| Conread position: | 3-287 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 3-288 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-298 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 4-284 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 5-139 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 12-279 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 15-180 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 15-273 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 187 |
| Conread position: | 15-288 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 27, 189 |
| Conread position: | 15-288 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 20, 112 |
| Conread position: | 15-289 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 118 |
| Conread position: | 16-290 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 26, 160 |
| Conread position: | 17-288 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 183 |
| Conread position: | 18-141 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 113 |
| Conread position: | 18-284 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 24, 99 |
| Conread position: | 20-289 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 23-149 |
| Cow position: | |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 23-276 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 27-279 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 29-289 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 13, 31 |
| Conread position: | 43-310 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 50-276 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 107 |
| Conread position: | 60-199 |
| Cow position: | |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 82, 29 |
| Conread position: | 77-289 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 200, 67 |
| Conread position: | 81-289 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 58, 123 |
| Conread position: | 82-279 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 100, 8 |
| Conread position: | 82-288 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 80 |
| Conread position: | 82-289 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 82-289 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 85-288 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 53 |
| Conread position: | 104-288 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 39, 90 |
| Conread position: | 115-289 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 112, 57 |
| Conread position: | 132-284 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 135-289 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 40, 64 |
| Conread position: | 162-282 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 92 |
Show alignments to all cow chromosomes.