Cow genome map
Conread name: | Ss1.1-Ova1-OVRM10069H08.5 |
Conread position: | 1-105 |
Cow position: | chr10:45299902-45299798 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 89 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-144 |
Cow position: | chr10:53762030-53762171 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 121 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 64, 17 |
Conread position: | 1-152 |
Cow position: | chr10:6921809-6921660 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 119 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 41, 18 |
Conread position: | 1-152 |
Cow position: | chr10:31250648-31250796 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 119 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 38, 17 |
Conread position: | 1-185 |
Cow position: | chr10:9529899-9530081 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 145 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-199 |
Cow position: | chr10:62325701-62325503 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 154 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-212 |
Cow position: | chr10:30741470-30741255 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 161 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 64, 17 |
Conread position: | 1-215 |
Cow position: | chr10:35306890-35307095 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 162 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-230 |
Cow position: | chr10:15873984-15874216 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 183 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 41, 16 |
Conread position: | 1-235 |
Cow position: | chr10:3986298-3986067 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 166 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 41, 18 |
Conread position: | 1-249 |
Cow position: | chr10:49624858-49624600 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 191 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 39, 16 |
Conread position: | 1-260 |
Cow position: | chr10:19126822-19127079 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 198 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 64, 17 |
Conread position: | 1-265 |
Cow position: | chr10:23096685-23096954 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 199 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 40, 18 |
Conread position: | 1-267 |
Cow position: | chr10:50044552-50044827 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 18 |
Conread position: | 1-267 |
Cow position: | chr10:51220984-51221245 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 204 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 64, 18 |
Conread position: | 1-274 |
Cow position: | chr10:21424588-21424867 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 18 |
Conread position: | 1-276 |
Cow position: | chr10:8649096-8648831 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 206 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-279 |
Cow position: | chr10:19590672-19590951 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 200 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 42, 16 |
Conread position: | 1-279 |
Cow position: | chr10:26620470-26620737 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 205 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 36, 17 |
Conread position: | 1-288 |
Cow position: | chr10:6038248-6038534 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-288 |
Cow position: | chr10:41984796-41985086 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 218 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 39, 17 |
Conread position: | 1-288 |
Cow position: | chr10:48255133-48255422 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 216 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-288 |
Cow position: | chr10:52589590-52589891 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 214 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 40, 17 |
Conread position: | 1-289 |
Cow position: | chr10:24786199-24785903 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 18 |
Conread position: | 1-289 |
Cow position: | chr10:30449972-30450259 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-289 |
Cow position: | chr10:51925530-51925221 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 221 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 78, 18 |
Conread position: | 1-289 |
Cow position: | chr10:59153569-59153844 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 11 |
Conread position: | 1-290 |
Cow position: | chr10:57458801-57458523 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 207 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 41, 18 |
Conread position: | 2-149 |
Cow position: | chr10:68251902-68251757 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 110 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 40, 16 |
Conread position: | 2-199 |
Cow position: | chr10:31368642-31368843 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 155 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 40, 16 |
Conread position: | 2-244 |
Cow position: | chr10:3115574-3115323 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 193 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 39, 16 |
Conread position: | 2-249 |
Cow position: | chr10:19704423-19704666 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 182 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 40, 19 |
Conread position: | 2-275 |
Cow position: | chr10:32584002-32583726 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 192 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 30, 16 |
Conread position: | 2-275 |
Cow position: | chr10:39314789-39314527 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 200 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 40, 20 |
Conread position: | 2-287 |
Cow position: | chr10:23948829-23949117 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 219 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 40, 17 |
Conread position: | 2-287 |
Cow position: | chr10:55012222-55011943 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 212 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 64, 10 |
Conread position: | 2-289 |
Cow position: | chr10:20109861-20110138 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 16 |
Conread position: | 2-289 |
Cow position: | chr10:38739619-38739353 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 209 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 51, 17 |
Conread position: | 2-290 |
Cow position: | chr10:62516972-62516675 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 16 |
Conread position: | 3-199 |
Cow position: | chr10:15391579-15391381 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 151 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 59, 20 |
Conread position: | 3-207 |
Cow position: | chr10:23404290-23404082 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 156 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 39, 12 |
Conread position: | 3-244 |
Cow position: | chr10:27576544-27576309 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 188 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 40, 9 |
Conread position: | 3-247 |
Cow position: | chr10:8760074-8760296 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 184 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 62, 15 |
Conread position: | 3-248 |
Cow position: | chr10:56705497-56705749 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 182 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 39, 16 |
Conread position: | 3-275 |
Cow position: | chr10:9341646-9341918 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 15 |
Conread position: | 3-276 |
Cow position: | chr10:29339307-29339571 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 189 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 38, 16 |
Conread position: | 3-279 |
Cow position: | chr10:8077072-8077337 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 215 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 39, 16 |
Conread position: | 3-279 |
Cow position: | chr10:38429460-38429734 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 16 |
Conread position: | 3-283 |
Cow position: | chr10:16649839-16650118 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 190 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 39, 121 |
Conread position: | 3-287 |
Cow position: | chr10:17863675-17863386 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 206 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 38, 16 |
Conread position: | 3-288 |
Cow position: | chr10:11032411-11032697 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 16 |
Conread position: | 3-289 |
Cow position: | chr10:31911010-31910741 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 211 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 39, 16 |
Conread position: | 3-289 |
Cow position: | chr10:58608191-58607906 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 203 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 39, 15 |
Conread position: | 3-298 |
Cow position: | chr10:22479637-22479934 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 15 |
Conread position: | 4-284 |
Cow position: | chr10:25479188-25478907 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 27 |
Conread position: | 5-139 |
Cow position: | chr10:8330700-8330566 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 12-279 |
Cow position: | chr10:46468616-46468877 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 11 |
Conread position: | 15-180 |
Cow position: | chr10:11404058-11404227 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 126 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 27, 112 |
Conread position: | 15-273 |
Cow position: | chr10:28038854-28039120 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 188 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 26, 187 |
Conread position: | 15-288 |
Cow position: | chr10:9568543-9568825 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 213 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 27, 189 |
Conread position: | 15-288 |
Cow position: | chr10:69544263-69544530 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 205 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 20, 112 |
Conread position: | 15-289 |
Cow position: | chr10:8412972-8413252 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 118 |
Conread position: | 16-290 |
Cow position: | chr10:65072038-65072309 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 207 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 26, 160 |
Conread position: | 17-288 |
Cow position: | chr10:31855412-31855129 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 183 |
Conread position: | 18-141 |
Cow position: | chr10:42139680-42139804 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 98 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 24, 113 |
Conread position: | 18-284 |
Cow position: | chr10:23135387-23135134 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 207 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 24, 99 |
Conread position: | 20-289 |
Cow position: | chr10:35792000-35791733 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 191 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 20, 40 |
Conread position: | 23-149 |
Cow position: | chr10:20312948-20313076 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 101 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 19, 49 |
Conread position: | 23-276 |
Cow position: | chr10:22977609-22977854 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 202 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 16, 33 |
Conread position: | 27-279 |
Cow position: | chr10:20478966-20478701 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 204 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 29-289 |
Cow position: | chr10:38015942-38015691 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 205 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 13, 31 |
Conread position: | 43-310 |
Cow position: | chr10:17698974-17699235 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 203 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 22, 74 |
Conread position: | 50-276 |
Cow position: | chr10:57563925-57563701 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 107 |
Conread position: | 60-199 |
Cow position: | chr10:613869-613727 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 114 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 82, 29 |
Conread position: | 77-289 |
Cow position: | chr10:64596440-64596229 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 161 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 200, 67 |
Conread position: | 81-289 |
Cow position: | chr10:58399274-58399481 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 166 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 58, 123 |
Conread position: | 82-279 |
Cow position: | chr10:22652705-22652510 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 157 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 100, 8 |
Conread position: | 82-288 |
Cow position: | chr10:47493204-47493404 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 151 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 57, 80 |
Conread position: | 82-289 |
Cow position: | chr10:36231981-36231784 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 151 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 186, 95 |
Conread position: | 82-289 |
Cow position: | chr10:40645929-40645734 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 146 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 85-288 |
Cow position: | chr10:67020625-67020427 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 148 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 94, 53 |
Conread position: | 104-288 |
Cow position: | chr10:11060184-11060002 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 140 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 39, 90 |
Conread position: | 115-289 |
Cow position: | chr10:3180648-3180818 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 141 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 112, 57 |
Conread position: | 132-284 |
Cow position: | chr10:24292240-24292393 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 127 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 9, 25 |
Conread position: | 135-289 |
Cow position: | chr10:2394512-2394663 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 127 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 40, 64 |
Conread position: | 162-282 |
Cow position: | chr10:25971050-25970929 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 102 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 18, 92 |
Show alignments to all cow chromosomes.