Cow genome map

Conread name: Ss1.1-Ova1-OVRM10069H08.5

Conread position: 1-113
Cow position:
Alignm length: 115
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 41, 17

Conread position: 1-139
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 14

Conread position: 1-161
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 18

Conread position: 1-161
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 17

Conread position: 1-165
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 13

Conread position: 1-184
Cow position:
Alignm length: 192
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 18

Conread position: 1-190
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 41, 17

Conread position: 1-198
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 17

Conread position: 1-199
Cow position:
Alignm length: 205
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 21

Conread position: 1-201
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 64, 17

Conread position: 1-207
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 18

Conread position: 1-235
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 18

Conread position: 1-235
Cow position:
Alignm length: 240
Alignm identity: 187
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 41, 16

Conread position: 1-237
Cow position:
Alignm length: 240
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 18

Conread position: 1-248
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 41, 21

Conread position: 1-249
Cow position:
Alignm length: 258
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 18

Conread position: 1-265
Cow position:
Alignm length: 277
Alignm identity: 193
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 41, 17

Conread position: 1-265
Cow position:
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 1-271
Cow position:
Alignm length: 285
Alignm identity: 200
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 20

Conread position: 1-275
Cow position:
Alignm length: 282
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 17

Conread position: 1-276
Cow position:
Alignm length: 295
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 17

Conread position: 1-276
Cow position:
Alignm length: 284
Alignm identity: 212
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 41, 17

Conread position: 1-279
Cow position:
Alignm length: 283
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 11

Conread position: 1-279
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 41, 21

Conread position: 1-279
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 41, 18

Conread position: 1-279
Cow position:
Alignm length: 286
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 17

Conread position: 1-284
Cow position:
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 1-284
Cow position:
Alignm length: 288
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 17

Conread position: 1-286
Cow position:
Alignm length: 293
Alignm identity: 215
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 67, 18

Conread position: 1-288
Cow position:
Alignm length: 300
Alignm identity: 216
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 42, 17

Conread position: 1-288
Cow position:
Alignm length: 303
Alignm identity: 211
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 18

Conread position: 1-289
Cow position:
Alignm length: 297
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 15

Conread position: 1-289
Cow position:
Alignm length: 292
Alignm identity: 218
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 41, 18

Conread position: 1-289
Cow position:
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 129

Conread position: 1-289
Cow position:
Alignm length: 293
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 17

Conread position: 1-289
Cow position:
Alignm length: 300
Alignm identity: 219
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 41, 17

Conread position: 1-289
Cow position:
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 17

Conread position: 1-289
Cow position:
Alignm length: 297
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 16

Conread position: 1-290
Cow position:
Alignm length: 296
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 18

Conread position: 1-328
Cow position:
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 13

Conread position: 2-176
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 16

Conread position: 2-228
Cow position:
Alignm length: 230
Alignm identity: 180
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 40, 16

Conread position: 2-230
Cow position:
Alignm length: 240
Alignm identity: 183
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 40, 16

Conread position: 2-263
Cow position:
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 59

Conread position: 2-284
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 16

Conread position: 2-289
Cow position:
Alignm length: 296
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 17

Conread position: 3-150
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 15

Conread position: 3-178
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 16

Conread position: 3-220
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 62, 9

Conread position: 3-225
Cow position:
Alignm length: 232
Alignm identity: 168
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 36, 18

Conread position: 3-243
Cow position:
Alignm length: 246
Alignm identity: 166
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 16

Conread position: 3-248
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 40, 16

Conread position: 3-271
Cow position:
Alignm length: 273
Alignm identity: 203
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 39, 16

Conread position: 3-275
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 16

Conread position: 3-279
Cow position:
Alignm length: 282
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 62, 16

Conread position: 3-284
Cow position:
Alignm length: 291
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 39, 15

Conread position: 3-286
Cow position:
Alignm length: 296
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 12

Conread position: 3-289
Cow position:
Alignm length: 295
Alignm identity: 199
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 15

Conread position: 3-289
Cow position:
Alignm length: 296
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 15

Conread position: 3-289
Cow position:
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 3-289
Cow position:
Alignm length: 295
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 68

Conread position: 3-289
Cow position:
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 16

Conread position: 3-289
Cow position:
Alignm length: 293
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 3-289
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 39, 16

Conread position: 5-265
Cow position:
Alignm length: 264
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 61, 13

Conread position: 5-276
Cow position:
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 13

Conread position: 7-289
Cow position:
Alignm length: 293
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 10

Conread position: 13-245
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 190

Conread position: 13-279
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 14

Conread position: 14-221
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 28, 0

Conread position: 15-208
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 26, 109

Conread position: 15-222
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 59

Conread position: 15-269
Cow position:
Alignm length: 259
Alignm identity: 193
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 35, 24

Conread position: 15-284
Cow position:
Alignm length: 281
Alignm identity: 187
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 12

Conread position: 15-290
Cow position:
Alignm length: 286
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 14

Conread position: 17-290
Cow position:
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 168

Conread position: 18-230
Cow position:
Alignm length: 219
Alignm identity: 172
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 22, 0

Conread position: 20-279
Cow position:
Alignm length: 270
Alignm identity: 206
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 22, 104

Conread position: 22-244
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 21, 93

Conread position: 22-289
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 20, 182

Conread position: 23-289
Cow position:
Alignm length: 272
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 101

Conread position: 25-279
Cow position:
Alignm length: 258
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 154

Conread position: 33-276
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 9, 74

Conread position: 39-198
Cow position:
Alignm length: 161
Alignm identity: 128
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 26, 135

Conread position: 39-284
Cow position:
Alignm length: 266
Alignm identity: 192
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 27, 83

Conread position: 39-288
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 159

Conread position: 39-289
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 103

Conread position: 40-214
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 170

Conread position: 51-294
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 14, 83

Conread position: 56-208
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 20

Conread position: 58-267
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 6

Conread position: 64-271
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 115, 61

Conread position: 64-289
Cow position:
Alignm length: 234
Alignm identity: 177
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 84, 74

Conread position: 64-289
Cow position:
Alignm length: 236
Alignm identity: 180
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 33, 133

Conread position: 65-279
Cow position:
Alignm length: 219
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 137

Conread position: 69-275
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 64

Conread position: 72-289
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 62, 86

Conread position: 78-289
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 103, 125

Conread position: 82-240
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 59, 114

Conread position: 83-286
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 66

Conread position: 85-288
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 81

Conread position: 85-289
Cow position:
Alignm length: 210
Alignm identity: 147
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 61

Conread position: 85-289
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 177

Conread position: 85-306
Cow position:
Alignm length: 226
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 119

Conread position: 90-288
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 90, 104

Conread position: 97-275
Cow position:
Alignm length: 184
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 120

Conread position: 115-289
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 35

Conread position: 131-272
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 72

Conread position: 131-290
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 11, 68

Conread position: 136-304
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 110

Conread position: 138-267
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 7, 68

Conread position: 150-279
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 53

Conread position: 150-284
Cow position:
Alignm length: 138
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 30, 92

Show alignments to all cow chromosomes.