Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10069H08.5 |
| Conread position: | 1-116 |
| Cow position: | |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-116 |
| Cow position: | |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-120 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 1-139 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 1-139 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-178 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-199 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 1-207 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-214 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 1-221 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 1-230 |
| Cow position: | |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 1-230 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 1-241 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 1-241 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-249 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 20 |
| Conread position: | 1-249 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-250 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-270 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-273 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-280 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 1-280 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-284 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 2-136 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 2-285 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 10 |
| Conread position: | 2-289 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 2-289 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 2-290 |
| Cow position: | |
| Alignm length: | 313 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 16, 221 |
| Conread position: | 3-122 |
| Cow position: | |
| Alignm length: | 122 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-180 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 3-207 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 3-254 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-275 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 3-275 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 4-118 |
| Cow position: | |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 4-118 |
| Cow position: | |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 4-178 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 61, 14 |
| Conread position: | 4-271 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 61, 14 |
| Conread position: | 4-290 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 5-176 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 35, 14 |
| Conread position: | 5-279 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 12-243 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 79 |
| Conread position: | 12-275 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 30, 183 |
| Conread position: | 15-184 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 15-249 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 188 |
| Conread position: | 15-275 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 161 |
| Conread position: | 15-279 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 197 |
| Conread position: | 15-289 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 186 |
| Conread position: | 15-290 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 16-194 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 16-271 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 17-262 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 184 |
| Conread position: | 17-288 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 128 |
| Conread position: | 17-290 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 20-284 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 45, 92 |
| Conread position: | 20-294 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 25-224 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 25-289 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 120 |
| Conread position: | 31-288 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 11, 169 |
| Conread position: | 39-275 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 59-289 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 64-289 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 117, 90 |
| Conread position: | 72-288 |
| Cow position: | |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 78-289 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 79-249 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 64, 117 |
| Conread position: | 85-249 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 41 |
| Conread position: | 85-288 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 57, 173 |
| Conread position: | 105-279 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 16, 45 |
| Conread position: | 107-325 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 77 |
| Conread position: | 115-289 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 64, 88 |
| Conread position: | 115-289 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 90 |
| Conread position: | 132-276 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 134-289 |
| Cow position: | |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 140-289 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 35, 115 |
| Conread position: | 156-290 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 174-289 |
| Cow position: | |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 28 |
Show alignments to all cow chromosomes.