Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10069H08.5 |
| Conread position: | 1-145 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 1-145 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-159 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-186 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-230 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-235 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-269 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 1-275 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-275 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 1-275 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-276 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 1-276 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 1-280 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-284 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-284 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 1-286 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 1-287 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-287 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 1-294 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 280, 17 |
| Conread position: | 2-219 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 2-249 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 2-259 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 178, 10 |
| Conread position: | 2-276 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 2-279 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 2-288 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 3-111 |
| Cow position: | |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 3-151 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-198 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-215 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 3-241 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 3-276 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 3-276 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 3-280 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-284 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 3-288 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 3-290 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 218 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 4-159 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 4-289 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 12-288 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 132 |
| Conread position: | 15-199 |
| Cow position: | |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 19, 131 |
| Conread position: | 15-222 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 65 |
| Conread position: | 15-269 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 139 |
| Conread position: | 15-279 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 15-288 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 15-289 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 182 |
| Conread position: | 15-289 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 22, 189 |
| Conread position: | 16-266 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 122 |
| Conread position: | 17-220 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 186 |
| Conread position: | 17-222 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 25, 171 |
| Conread position: | 17-279 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 82 |
| Conread position: | 17-290 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 18-230 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 34, 188 |
| Conread position: | 22-289 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 23-276 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 24-288 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 31-266 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 110 |
| Conread position: | 64-280 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 173 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 79, 132 |
| Conread position: | 65-283 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 66-241 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 68-280 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 78-289 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 124 |
| Conread position: | 83-289 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 121 |
| Conread position: | 86-274 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 81 |
| Conread position: | 89-279 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 56, 115 |
| Conread position: | 94-288 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 94 |
| Conread position: | 158-289 |
| Cow position: | |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 189-289 |
| Cow position: | |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 43, 63 |
Show alignments to all cow chromosomes.