Cow genome map
Conread name: | Ss1.1-Ova1-OVRM10069H08.5 |
Conread position: | 1-145 |
Cow position: | chr15:23109309-23109161 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 118 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 41, 11 |
Conread position: | 1-145 |
Cow position: | chr15:50561423-50561276 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 122 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-159 |
Cow position: | chr15:35283493-35283331 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 121 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 42, 17 |
Conread position: | 1-186 |
Cow position: | chr15:47821353-47821539 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 150 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 41, 18 |
Conread position: | 1-230 |
Cow position: | chr15:6749871-6749641 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 178 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-235 |
Cow position: | chr15:8022028-8022261 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-269 |
Cow position: | chr15:24411395-24411658 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 194 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 41, 21 |
Conread position: | 1-275 |
Cow position: | chr15:17213432-17213699 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 199 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-275 |
Cow position: | chr15:22886532-22886802 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 209 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 41, 13 |
Conread position: | 1-275 |
Cow position: | chr15:31907624-31907899 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-276 |
Cow position: | chr15:9000929-9001212 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 208 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 40, 17 |
Conread position: | 1-276 |
Cow position: | chr15:20482873-20482589 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 209 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-279 |
Cow position: | chr15:26673607-26673342 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 212 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 64, 17 |
Conread position: | 1-279 |
Cow position: | chr15:27863352-27863072 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 18 |
Conread position: | 1-279 |
Cow position: | chr15:36839199-36838925 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 18 |
Conread position: | 1-279 |
Cow position: | chr15:37964508-37964794 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-279 |
Cow position: | chr15:38322809-38323081 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 209 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 39, 17 |
Conread position: | 1-280 |
Cow position: | chr15:3572725-3572444 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 18 |
Conread position: | 1-284 |
Cow position: | chr15:12163545-12163259 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 213 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-284 |
Cow position: | chr15:34255748-34255487 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 207 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 60, 18 |
Conread position: | 1-286 |
Cow position: | chr15:39894571-39894850 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 202 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 41, 14 |
Conread position: | 1-287 |
Cow position: | chr15:22854383-22854671 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 17 |
Conread position: | 1-287 |
Cow position: | chr15:31182406-31182688 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 17 |
Conread position: | 1-288 |
Cow position: | chr15:30934569-30934287 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 218 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-289 |
Cow position: | chr15:9178228-9177948 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 16 |
Conread position: | 1-289 |
Cow position: | chr15:31599308-31599600 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-289 |
Cow position: | chr15:53118301-53118587 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 212 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 39, 18 |
Conread position: | 1-294 |
Cow position: | chr15:52981812-52982085 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 220 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 280, 17 |
Conread position: | 2-219 |
Cow position: | chr15:35967510-35967294 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 169 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 2-249 |
Cow position: | chr15:24864290-24864047 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 183 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 42, 17 |
Conread position: | 2-259 |
Cow position: | chr15:7883356-7883114 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 184 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 178, 10 |
Conread position: | 2-276 |
Cow position: | chr15:27247482-27247763 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 216 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 40, 18 |
Conread position: | 2-279 |
Cow position: | chr15:34037216-34036940 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 215 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 40, 17 |
Conread position: | 2-288 |
Cow position: | chr15:15214992-15215284 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 16 |
Conread position: | 3-111 |
Cow position: | chr15:10189339-10189447 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 93 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 39, 18 |
Conread position: | 3-151 |
Cow position: | chr15:46005672-46005524 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 121 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 39, 16 |
Conread position: | 3-198 |
Cow position: | chr15:12036788-12036987 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 149 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 39, 15 |
Conread position: | 3-215 |
Cow position: | chr15:27749201-27748997 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 164 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 62, 15 |
Conread position: | 3-241 |
Cow position: | chr15:42195288-42195051 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 185 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 62, 19 |
Conread position: | 3-276 |
Cow position: | chr15:5722686-5722415 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 206 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 38, 15 |
Conread position: | 3-276 |
Cow position: | chr15:31545373-31545099 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 198 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 40, 12 |
Conread position: | 3-279 |
Cow position: | chr15:31617031-31616751 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 203 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 40, 12 |
Conread position: | 3-280 |
Cow position: | chr15:40117472-40117201 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 198 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 39, 15 |
Conread position: | 3-284 |
Cow position: | chr15:39316866-39316575 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 197 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 39, 18 |
Conread position: | 3-288 |
Cow position: | chr15:24977198-24976927 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 223 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 39, 16 |
Conread position: | 3-289 |
Cow position: | chr15:4278083-4277799 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 15 |
Conread position: | 3-289 |
Cow position: | chr15:15921981-15922258 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 203 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 34, 19 |
Conread position: | 3-289 |
Cow position: | chr15:23957689-23957968 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 9 |
Conread position: | 3-290 |
Cow position: | chr15:4856774-4857055 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 218 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 39, 12 |
Conread position: | 4-159 |
Cow position: | chr15:17788087-17788243 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 38, 15 |
Conread position: | 4-289 |
Cow position: | chr15:23140147-23139890 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 209 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 12-288 |
Cow position: | chr15:9928342-9928622 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 202 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 29, 132 |
Conread position: | 15-199 |
Cow position: | chr15:44879591-44879779 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 144 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 19, 131 |
Conread position: | 15-222 |
Cow position: | chr15:14758263-14758054 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 161 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 15, 65 |
Conread position: | 15-269 |
Cow position: | chr15:26933963-26933722 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 187 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 27, 139 |
Conread position: | 15-279 |
Cow position: | chr15:50993732-50993997 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 203 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 25, 66 |
Conread position: | 15-288 |
Cow position: | chr15:44252352-44252627 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 200 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 50, 23 |
Conread position: | 15-289 |
Cow position: | chr15:26421611-26421331 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 182 |
Conread position: | 15-289 |
Cow position: | chr15:43248791-43248506 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 208 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 22, 189 |
Conread position: | 16-266 |
Cow position: | chr15:16585499-16585756 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 122 |
Conread position: | 17-220 |
Cow position: | chr15:43130300-43130512 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 153 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 20, 186 |
Conread position: | 17-222 |
Cow position: | chr15:40498305-40498098 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 161 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 25, 171 |
Conread position: | 17-279 |
Cow position: | chr15:4373474-4373726 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 82 |
Conread position: | 17-290 |
Cow position: | chr15:53045889-53045614 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 195 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 15, 10 |
Conread position: | 18-230 |
Cow position: | chr15:29900541-29900325 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 158 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 34, 188 |
Conread position: | 22-289 |
Cow position: | chr15:21836676-21836954 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 103 |
Conread position: | 23-276 |
Cow position: | chr15:28236894-28236651 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 185 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 59, 16 |
Conread position: | 24-288 |
Cow position: | chr15:27732410-27732662 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 208 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 41, 14 |
Conread position: | 31-266 |
Cow position: | chr15:26702071-26701836 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 171 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 11, 110 |
Conread position: | 64-280 |
Cow position: | chr15:33770655-33770873 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 173 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 79, 132 |
Conread position: | 65-283 |
Cow position: | chr15:2210614-2210833 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 163 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 17, 60 |
Conread position: | 66-241 |
Cow position: | chr15:10815148-10814979 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 134 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 31, 44 |
Conread position: | 68-280 |
Cow position: | chr15:10615688-10615481 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 160 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 14, 31 |
Conread position: | 78-289 |
Cow position: | chr15:36671985-36671769 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 124 |
Conread position: | 83-289 |
Cow position: | chr15:40009593-40009385 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 147 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 64, 121 |
Conread position: | 86-274 |
Cow position: | chr15:25111108-25110918 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 144 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 56, 81 |
Conread position: | 89-279 |
Cow position: | chr15:5527247-5527439 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 153 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 56, 115 |
Conread position: | 94-288 |
Cow position: | chr15:51583297-51583488 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 147 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 49, 94 |
Conread position: | 158-289 |
Cow position: | chr15:6282798-6282667 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 110 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 22, 45 |
Conread position: | 189-289 |
Cow position: | chr15:22606974-22607072 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 87 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 43, 63 |
Show alignments to all cow chromosomes.