Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10069H08.5 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-188 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-194 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 1-198 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 1-207 |
| Cow position: | |
| Alignm length: | 217 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 1-222 |
| Cow position: | |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-230 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 1-239 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-240 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 1-241 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-259 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 1-265 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 1-267 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-275 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 1-275 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 1-280 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-287 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 231, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 1-290 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 1-290 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-294 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 1-297 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-304 |
| Cow position: | |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 2-229 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 2-245 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 10 |
| Conread position: | 2-289 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 3-127 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-220 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 121 |
| Conread position: | 3-267 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 71, 16 |
| Conread position: | 3-282 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 3-288 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 39, 9 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-290 |
| Cow position: | |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-290 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 4-173 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 15 |
| Conread position: | 4-248 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 4-251 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 4-290 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 7-289 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 12-207 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 30, 188 |
| Conread position: | 15-290 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 16-289 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 17-271 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 45, 28 |
| Conread position: | 18-181 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 125 |
| Conread position: | 20-290 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 12, 7 |
| Conread position: | 26-279 |
| Cow position: | |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 97 |
| Conread position: | 31-271 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 39-279 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 26, 146 |
| Conread position: | 39-286 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 91 |
| Conread position: | 39-288 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 31, 78 |
| Conread position: | 40-279 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 47-279 |
| Cow position: | |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 15, 160 |
| Conread position: | 50-253 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 15, 75 |
| Conread position: | 58-230 |
| Cow position: | |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 58-267 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 81, 19 |
| Conread position: | 61-279 |
| Cow position: | |
| Alignm length: | 223 |
| Alignm identity: | 174 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 76, 135 |
| Conread position: | 64-288 |
| Cow position: | |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 67-276 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 73, 53 |
| Conread position: | 77-285 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 82-279 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 32, 101 |
| Conread position: | 82-284 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 85-289 |
| Cow position: | |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 32 |
| Conread position: | 86-288 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 93, 51 |
| Conread position: | 90-290 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 134 |
| Conread position: | 95-249 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 48, 62 |
| Conread position: | 109-288 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 70, 47 |
| Conread position: | 111-289 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 15, 94 |
| Conread position: | 113-244 |
| Cow position: | |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 91 |
| Conread position: | 114-289 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 117-289 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 127-288 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 70 |
| Conread position: | 131-290 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 48, 80 |
Show alignments to all cow chromosomes.