Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10069H08.5 |
| Conread position: | 1-123 |
| Cow position: | |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-124 |
| Cow position: | |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-124 |
| Cow position: | |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 1-183 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-206 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 1-216 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-228 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-273 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 1-276 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 1-280 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-280 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 1-284 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 1-284 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-287 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 1-290 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 141, 17 |
| Conread position: | 1-294 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 2-139 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 2-279 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 2-289 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 2-289 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 3-190 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-273 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 3-273 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 3-276 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 3-290 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 14-291 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 15-284 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 18-290 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 21-199 |
| Cow position: | |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 24-234 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 28-267 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 29-276 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 13, 52 |
| Conread position: | 29-289 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 10, 172 |
| Conread position: | 31-290 |
| Cow position: | |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 34, 108 |
| Conread position: | 41-247 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 12, 112 |
| Conread position: | 42-279 |
| Cow position: | |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 153 |
| Conread position: | 58-289 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 12 |
| Conread position: | 64-288 |
| Cow position: | |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 81 |
| Conread position: | 65-289 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 74-289 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 71, 130 |
| Conread position: | 82-263 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 82-279 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 82-289 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 62, 114 |
| Conread position: | 85-249 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 147, 64 |
| Conread position: | 85-279 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 97, 118 |
| Conread position: | 85-289 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 88-289 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 93, 65 |
| Conread position: | 96-288 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 101 |
| Conread position: | 97-279 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 53 |
| Conread position: | 114-276 |
| Cow position: | |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 113, 78 |
| Conread position: | 150-279 |
| Cow position: | |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 31, 46 |
Show alignments to all cow chromosomes.