Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10069H08.5 |
| Conread position: | 1-127 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-127 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 1-140 |
| Cow position: | |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-151 |
| Cow position: | |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-153 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-170 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 1-180 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 1-206 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 1-207 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-249 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-269 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 1-274 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-275 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-276 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 34 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 41, 23 |
| Conread position: | 1-285 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-320 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 2-273 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 2-274 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 2-276 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 2-279 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 2-284 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 34, 16 |
| Conread position: | 2-286 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 2-289 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 2-290 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 3-180 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 3-232 |
| Cow position: | |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 3-248 |
| Cow position: | |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 3-248 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 15 |
| Conread position: | 3-275 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-277 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 62, 14 |
| Conread position: | 3-288 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-292 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 4-139 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 4-252 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 4-289 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 6-241 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 132 |
| Conread position: | 10-289 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 30, 21 |
| Conread position: | 12-286 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 31, 75 |
| Conread position: | 13-212 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 13-279 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 28, 193 |
| Conread position: | 13-288 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 29, 113 |
| Conread position: | 14-279 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 192 |
| Conread position: | 15-170 |
| Cow position: | |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 51, 153 |
| Conread position: | 15-279 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 191 |
| Conread position: | 15-288 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 16-166 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 16-178 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 110 |
| Conread position: | 16-208 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 17-188 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 25, 113 |
| Conread position: | 17-194 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 17-288 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 17-289 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 48, 21 |
| Conread position: | 18-185 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 21-289 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 102 |
| Conread position: | 24-190 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 24-198 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 24-271 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 177 |
| Conread position: | 24-279 |
| Cow position: | |
| Alignm length: | 264 |
| Alignm identity: | 201 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 24-279 |
| Cow position: | |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 26-162 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 26-270 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 16, 55 |
| Conread position: | 28-289 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 156 |
| Conread position: | 31-288 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 125 |
| Conread position: | 34-186 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 39-279 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 12, 163 |
| Conread position: | 39-284 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 161 |
| Conread position: | 64-279 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 81 |
| Conread position: | 64-289 |
| Cow position: | |
| Alignm length: | 229 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 131 |
| Conread position: | 72-280 |
| Cow position: | |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 112 |
| Conread position: | 73-273 |
| Cow position: | |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 8 |
| Conread position: | 76-287 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 78-279 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 103, 125 |
| Conread position: | 85-279 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 57, 138 |
| Conread position: | 85-280 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 142, 107 |
| Conread position: | 94-276 |
| Cow position: | |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 97-248 |
| Cow position: | |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 135, 16 |
| Conread position: | 98-289 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 52 |
| Conread position: | 106-275 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 70, 149 |
| Conread position: | 115-289 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 115-289 |
| Cow position: | |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 119-276 |
| Cow position: | |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 19, 77 |
| Conread position: | 131-249 |
| Cow position: | |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 132-244 |
| Cow position: | |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 27 |
Show alignments to all cow chromosomes.