Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10069H08.5 |
| Conread position: | 1-107 |
| Cow position: | |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-127 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-148 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-176 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 1-180 |
| Cow position: | |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-194 |
| Cow position: | |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 1-195 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 1-199 |
| Cow position: | |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 1-240 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-265 |
| Cow position: | |
| Alignm length: | 269 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-284 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 64, 23 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 226, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 2-288 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 2-288 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 9 |
| Conread position: | 2-289 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 3-212 |
| Cow position: | |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-274 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 37, 16 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 4-185 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 4-220 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 4-232 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 5-289 |
| Cow position: | |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 12-279 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 30, 180 |
| Conread position: | 15-195 |
| Cow position: | |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 107 |
| Conread position: | 15-269 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 14 |
| Conread position: | 15-279 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 23-288 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 19, 178 |
| Conread position: | 26-288 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 16, 238 |
| Conread position: | 39-284 |
| Cow position: | |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 39-289 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 132 |
| Conread position: | 56-254 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 9, 147 |
| Conread position: | 78-249 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 98 |
| Conread position: | 82-279 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 57, 101 |
| Conread position: | 82-289 |
| Cow position: | |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 127 |
| Conread position: | 86-288 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 115 |
| Conread position: | 101-289 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 101-294 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 101-308 |
| Cow position: | |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 78, 102 |
| Conread position: | 102-288 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 98 |
| Conread position: | 112-280 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 69, 99 |
| Conread position: | 123-276 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 126-252 |
| Cow position: | |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 77 |
| Conread position: | 135-288 |
| Cow position: | |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 61 |
| Conread position: | 138-276 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 34, 67 |
| Conread position: | 162-289 |
| Cow position: | |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 71, 28 |
Show alignments to all cow chromosomes.