Cow genome map
Conread name: | Ss1.1-Ova1-OVRM10069H08.5 |
Conread position: | 1-107 |
Cow position: | chr20:35683248-35683354 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 90 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-127 |
Cow position: | chr20:2456186-2456060 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 42, 17 |
Conread position: | 1-148 |
Cow position: | chr20:13608911-13609058 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 113 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 41, 18 |
Conread position: | 1-176 |
Cow position: | chr20:32668128-32667955 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 137 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 41, 16 |
Conread position: | 1-180 |
Cow position: | chr20:5763136-5763320 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 139 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 41, 18 |
Conread position: | 1-194 |
Cow position: | chr20:19865405-19865214 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 157 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 38, 13 |
Conread position: | 1-195 |
Cow position: | chr20:26750056-26750247 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 151 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 41, 14 |
Conread position: | 1-199 |
Cow position: | chr20:7526882-7527075 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 145 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 64, 18 |
Conread position: | 1-240 |
Cow position: | chr20:1205779-1206018 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 172 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-265 |
Cow position: | chr20:19339723-19339982 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 203 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 41, 18 |
Conread position: | 1-284 |
Cow position: | chr20:10838054-10838345 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 211 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 1-288 |
Cow position: | chr20:4204443-4204160 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 210 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 64, 23 |
Conread position: | 1-288 |
Cow position: | chr20:20359624-20359909 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 211 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 42, 17 |
Conread position: | 1-288 |
Cow position: | chr20:38858275-38858540 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 214 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 226, 17 |
Conread position: | 1-289 |
Cow position: | chr20:220766-220483 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 223 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 41, 16 |
Conread position: | 1-289 |
Cow position: | chr20:7182529-7182809 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 216 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 41, 17 |
Conread position: | 2-288 |
Cow position: | chr20:26077239-26076952 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 214 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 40, 20 |
Conread position: | 2-288 |
Cow position: | chr20:40511601-40511890 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 204 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 31, 9 |
Conread position: | 2-289 |
Cow position: | chr20:34178321-34178610 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 16 |
Conread position: | 3-212 |
Cow position: | chr20:25274137-25274346 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 168 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 39, 15 |
Conread position: | 3-274 |
Cow position: | chr20:23235186-23234917 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 15 |
Conread position: | 3-279 |
Cow position: | chr20:8262072-8261788 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 218 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 37, 16 |
Conread position: | 3-279 |
Cow position: | chr20:17670339-17670063 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 208 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 39, 16 |
Conread position: | 3-279 |
Cow position: | chr20:25823433-25823159 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 210 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 39, 12 |
Conread position: | 3-279 |
Cow position: | chr20:33178362-33178643 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 206 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 39, 15 |
Conread position: | 3-289 |
Cow position: | chr20:14679773-14679485 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 15 |
Conread position: | 3-289 |
Cow position: | chr20:27001542-27001264 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 15 |
Conread position: | 4-185 |
Cow position: | chr20:14362992-14363166 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 138 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 38, 11 |
Conread position: | 4-220 |
Cow position: | chr20:42255016-42254794 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 154 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 38, 11 |
Conread position: | 4-232 |
Cow position: | chr20:30855604-30855831 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 171 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 35, 11 |
Conread position: | 5-289 |
Cow position: | chr20:26880745-26881047 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 227 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 37, 14 |
Conread position: | 12-279 |
Cow position: | chr20:19266302-19266038 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 193 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 30, 180 |
Conread position: | 15-195 |
Cow position: | chr20:4933924-4934101 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 140 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 27, 107 |
Conread position: | 15-269 |
Cow position: | chr20:12676575-12676331 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 191 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 25, 14 |
Conread position: | 15-279 |
Cow position: | chr20:25686202-25686471 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 192 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 27, 102 |
Conread position: | 23-288 |
Cow position: | chr20:20471921-20471655 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 205 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 19, 178 |
Conread position: | 26-288 |
Cow position: | chr20:5576910-5576634 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 192 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 16, 238 |
Conread position: | 39-284 |
Cow position: | chr20:38124008-38123762 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 191 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 26, 102 |
Conread position: | 39-289 |
Cow position: | chr20:24234275-24234027 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 132 |
Conread position: | 56-254 |
Cow position: | chr20:2801991-2802190 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 151 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 9, 147 |
Conread position: | 78-249 |
Cow position: | chr20:26315519-26315684 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 135 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 56, 98 |
Conread position: | 82-279 |
Cow position: | chr20:24868959-24869147 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 142 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 57, 101 |
Conread position: | 82-289 |
Cow position: | chr20:32577845-32578053 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 157 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 53, 127 |
Conread position: | 86-288 |
Cow position: | chr20:6571404-6571200 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 150 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 52, 115 |
Conread position: | 101-289 |
Cow position: | chr20:14831559-14831745 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 143 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 101-294 |
Cow position: | chr20:14865120-14865314 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 136 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 46, 102 |
Conread position: | 101-308 |
Cow position: | chr20:11355273-11355069 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 158 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 78, 102 |
Conread position: | 102-288 |
Cow position: | chr20:13956099-13955907 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 140 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 80, 98 |
Conread position: | 112-280 |
Cow position: | chr20:37609275-37609107 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 130 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 69, 99 |
Conread position: | 123-276 |
Cow position: | chr20:6045397-6045541 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 121 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 19, 71 |
Conread position: | 126-252 |
Cow position: | chr20:15918013-15917885 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 53, 77 |
Conread position: | 135-288 |
Cow position: | chr20:15576865-15577022 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 128 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 8, 61 |
Conread position: | 138-276 |
Cow position: | chr20:14471526-14471666 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 113 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 34, 67 |
Conread position: | 162-289 |
Cow position: | chr20:12362871-12362996 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 105 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 71, 28 |
Show alignments to all cow chromosomes.