Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10069H08.5 |
| Conread position: | 1-184 |
| Cow position: | |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 1-194 |
| Cow position: | |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 1-194 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-198 |
| Cow position: | |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-209 |
| Cow position: | |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-222 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 178, 18 |
| Conread position: | 1-280 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 1-280 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-290 |
| Cow position: | |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 38, 20 |
| Conread position: | 1-291 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 1-294 |
| Cow position: | |
| Alignm length: | 305 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 2-191 |
| Cow position: | |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 2-288 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 2-290 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 216 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 3-179 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 3-284 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 38, 16 |
| Conread position: | 4-202 |
| Cow position: | |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 5-279 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 10 |
| Conread position: | 7-290 |
| Cow position: | |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 35, 11 |
| Conread position: | 15-152 |
| Cow position: | |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 15-275 |
| Cow position: | |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 15-276 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 138 |
| Conread position: | 15-279 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 27, 151 |
| Conread position: | 15-284 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 46, 24 |
| Conread position: | 18-289 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 20-289 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 87 |
| Conread position: | 20-290 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 12, 129 |
| Conread position: | 21-289 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 16, 86 |
| Conread position: | 24-263 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 25-186 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 25-191 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 39-275 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 26, 98 |
| Conread position: | 39-289 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 25, 75 |
| Conread position: | 40-300 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 64-199 |
| Cow position: | |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 127 |
| Conread position: | 82-286 |
| Cow position: | |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 98, 124 |
| Conread position: | 82-291 |
| Cow position: | |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 61, 122 |
| Conread position: | 85-274 |
| Cow position: | |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 142, 22 |
| Conread position: | 86-279 |
| Cow position: | |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 57, 107 |
| Conread position: | 98-289 |
| Cow position: | |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 132-289 |
| Cow position: | |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 95, 49 |
Show alignments to all cow chromosomes.