Cow genome map

Conread name: Ss1.1-Ova1-OVRM10069H08.5

Conread position: 1-150
Cow position: chr25:30021182-30021033 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 17

Conread position: 1-198
Cow position: chr25:22542701-22542891 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 17

Conread position: 1-199
Cow position: chr25:33204970-33205170 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 17

Conread position: 1-207
Cow position: chr25:26240651-26240441 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 17

Conread position: 1-248
Cow position: chr25:34970575-34970329 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 1-249
Cow position: chr25:16691769-16691524 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 17

Conread position: 1-276
Cow position: chr25:29312225-29312504 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 18

Conread position: 1-279
Cow position: chr25:11989401-11989682 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 21

Conread position: 1-279
Cow position: chr25:33411370-33411090 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 1-288
Cow position: chr25:14570484-14570191 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 64, 17

Conread position: 1-288
Cow position: chr25:20076610-20076320 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 203
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 40, 17

Conread position: 1-288
Cow position: chr25:24405621-24405913 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 1-288
Cow position: chr25:40956875-40957165 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 215
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 64, 17

Conread position: 1-290
Cow position: chr25:20624823-20625105 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 1-300
Cow position: chr25:32606213-32606514 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 41, 19

Conread position: 1-307
Cow position: chr25:26457565-26457881 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 17

Conread position: 2-191
Cow position: chr25:20811262-20811453 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 40, 10

Conread position: 2-285
Cow position: chr25:18161394-18161116 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 63, 19

Conread position: 2-288
Cow position: chr25:10748389-10748682 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 16

Conread position: 3-241
Cow position: chr25:34378994-34379236 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 15

Conread position: 3-288
Cow position: chr25:33246027-33245757 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 62, 16

Conread position: 3-289
Cow position: chr25:23410769-23410485 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 3-290
Cow position: chr25:22575418-22575695 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 46, 15

Conread position: 5-279
Cow position: chr25:10011949-10012213 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 10

Conread position: 6-207
Cow position: chr25:13562545-13562338 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 9

Conread position: 9-289
Cow position: chr25:30035656-30035370 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 10

Conread position: 15-241
Cow position: chr25:16560073-16560308 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 181
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 50, 186

Conread position: 15-286
Cow position: chr25:8576795-8576518 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 27, 168

Conread position: 15-289
Cow position: chr25:14466993-14467264 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 27, 114

Conread position: 20-206
Cow position: chr25:13727292-13727475 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 160

Conread position: 31-308
Cow position: chr25:9519404-9519129 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 11, 100

Conread position: 38-288
Cow position: chr25:22736191-22735948 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 123

Conread position: 50-289
Cow position: chr25:12234702-12234936 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 19, 24

Conread position: 64-288
Cow position: chr25:33691607-33691376 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 23, 142

Conread position: 72-279
Cow position: chr25:36643917-36644117 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 157, 61

Conread position: 82-215
Cow position: chr25:107056-107189 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 59

Conread position: 83-279
Cow position: chr25:15377353-15377160 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 126

Conread position: 83-287
Cow position: chr25:8560895-8560691 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 71

Conread position: 83-288
Cow position: chr25:12239121-12239325 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 91, 54

Conread position: 91-287
Cow position: chr25:10204856-10205055 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 37

Conread position: 107-279
Cow position: chr25:25961966-25961800 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 87

Show alignments to all cow chromosomes.