Cow genome map

Conread name: Ss1.1-Ova1-OVRM10069H08.5

Conread position: 1-128
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 40, 17

Conread position: 1-130
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 17

Conread position: 1-138
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 17

Conread position: 1-141
Cow position:
Alignm length: 143
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 17

Conread position: 1-170
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 18

Conread position: 1-170
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 17

Conread position: 1-180
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 41, 17

Conread position: 1-202
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 17

Conread position: 1-202
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 17

Conread position: 1-204
Cow position:
Alignm length: 208
Alignm identity: 158
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 64, 17

Conread position: 1-205
Cow position:
Alignm length: 212
Alignm identity: 159
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 41, 17

Conread position: 1-206
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 94, 17

Conread position: 1-219
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 21

Conread position: 1-227
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 17

Conread position: 1-242
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 18

Conread position: 1-244
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 65, 18

Conread position: 1-246
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 138, 17

Conread position: 1-274
Cow position:
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 15

Conread position: 1-275
Cow position:
Alignm length: 280
Alignm identity: 210
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 41, 11

Conread position: 1-276
Cow position:
Alignm length: 278
Alignm identity: 202
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 42, 14

Conread position: 1-276
Cow position:
Alignm length: 282
Alignm identity: 205
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 40, 17

Conread position: 1-276
Cow position:
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 17

Conread position: 1-276
Cow position:
Alignm length: 284
Alignm identity: 199
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 17

Conread position: 1-276
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 1-279
Cow position:
Alignm length: 282
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 17

Conread position: 1-279
Cow position:
Alignm length: 282
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 18

Conread position: 1-279
Cow position:
Alignm length: 287
Alignm identity: 211
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 41, 17

Conread position: 1-279
Cow position:
Alignm length: 287
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 1-279
Cow position:
Alignm length: 286
Alignm identity: 199
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 20

Conread position: 1-279
Cow position:
Alignm length: 290
Alignm identity: 214
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 42, 17

Conread position: 1-284
Cow position:
Alignm length: 293
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 1-287
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 17

Conread position: 1-288
Cow position:
Alignm length: 297
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 18

Conread position: 1-288
Cow position:
Alignm length: 294
Alignm identity: 215
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 41, 17

Conread position: 1-288
Cow position:
Alignm length: 301
Alignm identity: 218
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 64, 17

Conread position: 1-288
Cow position:
Alignm length: 294
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 1-288
Cow position:
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 11

Conread position: 1-288
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 18

Conread position: 1-288
Cow position:
Alignm length: 300
Alignm identity: 216
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 60, 18

Conread position: 1-288
Cow position:
Alignm length: 292
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 18

Conread position: 1-289
Cow position:
Alignm length: 294
Alignm identity: 218
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 44, 17

Conread position: 1-289
Cow position:
Alignm length: 293
Alignm identity: 211
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 18

Conread position: 1-289
Cow position:
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 1-289
Cow position:
Alignm length: 293
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 14

Conread position: 1-289
Cow position:
Alignm length: 303
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 1-289
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 18

Conread position: 1-289
Cow position:
Alignm length: 294
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 22

Conread position: 1-307
Cow position:
Alignm length: 315
Alignm identity: 222
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 18

Conread position: 2-191
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 17

Conread position: 2-206
Cow position:
Alignm length: 213
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 40, 17

Conread position: 2-236
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 40, 15

Conread position: 2-275
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 17

Conread position: 2-276
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 40, 21

Conread position: 2-284
Cow position:
Alignm length: 291
Alignm identity: 199
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 17

Conread position: 2-289
Cow position:
Alignm length: 306
Alignm identity: 224
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 63, 13

Conread position: 2-289
Cow position:
Alignm length: 298
Alignm identity: 225
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 40, 16

Conread position: 2-289
Cow position:
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 17

Conread position: 2-290
Cow position:
Alignm length: 298
Alignm identity: 221
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 40, 17

Conread position: 2-290
Cow position:
Alignm length: 317
Alignm identity: 236
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 31, 17

Conread position: 2-290
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 17

Conread position: 3-142
Cow position:
Alignm length: 143
Alignm identity: 116
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 62, 18

Conread position: 3-186
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 15

Conread position: 3-199
Cow position:
Alignm length: 200
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 16

Conread position: 3-202
Cow position:
Alignm length: 208
Alignm identity: 160
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 39, 15

Conread position: 3-276
Cow position:
Alignm length: 283
Alignm identity: 209
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 42, 16

Conread position: 3-279
Cow position:
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 3-284
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 15

Conread position: 3-285
Cow position:
Alignm length: 289
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 3-287
Cow position:
Alignm length: 291
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 16

Conread position: 3-288
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 16

Conread position: 3-289
Cow position:
Alignm length: 298
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 3-289
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 137, 15

Conread position: 3-289
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 40, 20

Conread position: 3-289
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 15

Conread position: 3-290
Cow position:
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 3-293
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 16

Conread position: 4-237
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 39, 14

Conread position: 4-286
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 39, 11

Conread position: 5-115
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 13

Conread position: 8-288
Cow position:
Alignm length: 289
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 7

Conread position: 15-170
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 76

Conread position: 15-244
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 30, 188

Conread position: 15-244
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 24

Conread position: 15-279
Cow position:
Alignm length: 273
Alignm identity: 199
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 27, 117

Conread position: 15-279
Cow position:
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 25

Conread position: 15-286
Cow position:
Alignm length: 279
Alignm identity: 194
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 26, 131

Conread position: 15-286
Cow position:
Alignm length: 279
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 74, 23

Conread position: 15-287
Cow position:
Alignm length: 277
Alignm identity: 205
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 27, 122

Conread position: 18-284
Cow position:
Alignm length: 270
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 24, 178

Conread position: 21-279
Cow position:
Alignm length: 270
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 9

Conread position: 21-289
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 106

Conread position: 25-288
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 7, 60

Conread position: 27-289
Cow position:
Alignm length: 272
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 227

Conread position: 28-279
Cow position:
Alignm length: 260
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 13, 180

Conread position: 31-252
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 86

Conread position: 32-279
Cow position:
Alignm length: 255
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 187

Conread position: 34-288
Cow position:
Alignm length: 270
Alignm identity: 198
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 7, 170

Conread position: 38-279
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 27, 150

Conread position: 39-197
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 141

Conread position: 39-281
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 153

Conread position: 43-275
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 116

Conread position: 55-222
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 31

Conread position: 57-279
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 8, 89

Conread position: 66-245
Cow position:
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 113

Conread position: 67-230
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 108

Conread position: 73-289
Cow position:
Alignm length: 221
Alignm identity: 176
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 64, 131

Conread position: 79-289
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 100, 62

Conread position: 81-279
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 10

Conread position: 83-288
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 50

Conread position: 85-286
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 63, 97

Conread position: 88-279
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 23

Conread position: 107-284
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 72, 96

Conread position: 108-279
Cow position:
Alignm length: 174
Alignm identity: 143
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 31, 95

Conread position: 114-276
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 135

Conread position: 114-289
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 65, 89

Conread position: 133-276
Cow position:
Alignm length: 146
Alignm identity: 119
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 11, 41

Conread position: 133-289
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 68

Conread position: 135-289
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 68

Conread position: 144-287
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 58

Conread position: 144-289
Cow position:
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 59

Show alignments to all cow chromosomes.