Cow genome map

Conread name: Ss1.1-Ova1-OVRM10069H08.5

Conread position: 1-110
Cow position: chr8:13900525-13900414 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 1-115
Cow position: chr8:46640212-46640325 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 41, 18

Conread position: 1-117
Cow position: chr8:24547141-24547025 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 40, 17

Conread position: 1-170
Cow position: chr8:41318161-41317992 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 17

Conread position: 1-185
Cow position: chr8:37487172-37487362 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 18

Conread position: 1-208
Cow position: chr8:29414018-29413805 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 17

Conread position: 1-208
Cow position: chr8:34317946-34318161 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 41, 18

Conread position: 1-221
Cow position: chr8:33842880-33842655 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 41, 18

Conread position: 1-222
Cow position: chr8:11249355-11249575 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 41, 18

Conread position: 1-223
Cow position: chr8:32277900-32278118 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 64, 17

Conread position: 1-228
Cow position: chr8:5997645-5997865 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 17

Conread position: 1-231
Cow position: chr8:1099068-1099290 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 64, 17

Conread position: 1-241
Cow position: chr8:20682523-20682279 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 17

Conread position: 1-241
Cow position: chr8:32827547-32827794 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 17

Conread position: 1-249
Cow position: chr8:31814918-31815172 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 76

Conread position: 1-249
Cow position: chr8:49265176-49265433 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 196
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 17

Conread position: 1-267
Cow position: chr8:27053477-27053741 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 17

Conread position: 1-276
Cow position: chr8:21282182-21281913 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 60, 17

Conread position: 1-276
Cow position: chr8:32983976-32984256 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 41, 20

Conread position: 1-277
Cow position: chr8:13738636-13738345 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 17

Conread position: 1-279
Cow position: chr8:44704216-44703936 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 1-280
Cow position: chr8:58334667-58334391 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 41, 15

Conread position: 1-284
Cow position: chr8:11896329-11896061 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 41, 17

Conread position: 1-288
Cow position: chr8:13810327-13810047 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 64, 17

Conread position: 1-288
Cow position: chr8:23161075-23160787 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 199
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 12

Conread position: 1-288
Cow position: chr8:39985612-39985901 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 41, 20

Conread position: 1-288
Cow position: chr8:55829222-55829502 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 17

Conread position: 1-289
Cow position: chr8:11638240-11637963 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 207
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 18

Conread position: 1-289
Cow position: chr8:24834828-24834562 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 18

Conread position: 1-289
Cow position: chr8:29936043-29935755 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 17

Conread position: 1-289
Cow position: chr8:32079557-32079855 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 233
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 41, 18

Conread position: 1-289
Cow position: chr8:45486723-45486446 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 41, 21

Conread position: 1-289
Cow position: chr8:50266415-50266132 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 11

Conread position: 1-289
Cow position: chr8:51959283-51959569 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 1-290
Cow position: chr8:52863943-52863650 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 232
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 41, 17

Conread position: 1-294
Cow position: chr8:36505500-36505199 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 11

Conread position: 2-139
Cow position: chr8:45586299-45586435 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 17

Conread position: 2-185
Cow position: chr8:25075717-25075534 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 155
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 41, 16

Conread position: 2-235
Cow position: chr8:942935-942699 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 16

Conread position: 2-274
Cow position: chr8:20131942-20131678 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 17

Conread position: 2-279
Cow position: chr8:28221442-28221719 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 16

Conread position: 2-279
Cow position: chr8:55305206-55304924 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 17

Conread position: 2-288
Cow position: chr8:9811925-9811629 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 17

Conread position: 2-288
Cow position: chr8:25573164-25572888 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 13

Conread position: 2-289
Cow position: chr8:36363939-36364214 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 38, 17

Conread position: 2-290
Cow position: chr8:8134378-8134669 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 63, 16

Conread position: 2-290
Cow position: chr8:53866224-53865943 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 16

Conread position: 3-180
Cow position: chr8:7671462-7671296 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 39, 15

Conread position: 3-227
Cow position: chr8:45987675-45987905 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 39, 16

Conread position: 3-275
Cow position: chr8:13976014-13975746 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 3-276
Cow position: chr8:19512351-19512615 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 214
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 85, 15

Conread position: 3-276
Cow position: chr8:25871851-25871574 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 19

Conread position: 3-276
Cow position: chr8:42577970-42578226 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 176, 15

Conread position: 3-289
Cow position: chr8:59506953-59507243 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 39, 12

Conread position: 4-288
Cow position: chr8:26922747-26922474 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 11

Conread position: 11-289
Cow position: chr8:31314016-31313732 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 28

Conread position: 12-279
Cow position: chr8:34288042-34287775 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 15, 103

Conread position: 13-289
Cow position: chr8:45689795-45690069 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 59, 16

Conread position: 15-186
Cow position: chr8:43693322-43693147 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 27, 0

Conread position: 15-206
Cow position: chr8:6469053-6469249 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 27, 127

Conread position: 15-225
Cow position: chr8:33510508-33510718 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 77

Conread position: 15-236
Cow position: chr8:3533611-3533395 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 128

Conread position: 15-251
Cow position: chr8:13144329-13144568 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 27, 160

Conread position: 15-271
Cow position: chr8:46203379-46203133 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 110

Conread position: 15-283
Cow position: chr8:21137164-21137426 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 27, 48

Conread position: 15-288
Cow position: chr8:60320631-60320359 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 74, 27

Conread position: 15-289
Cow position: chr8:48763661-48763395 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 127

Conread position: 16-212
Cow position: chr8:11942677-11942486 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 165

Conread position: 16-289
Cow position: chr8:18220627-18220890 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 48

Conread position: 16-289
Cow position: chr8:51904925-51905210 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 26, 147

Conread position: 17-249
Cow position: chr8:12538505-12538738 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 190
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 93, 12

Conread position: 19-230
Cow position: chr8:27682045-27681833 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 60

Conread position: 20-180
Cow position: chr8:34113535-34113375 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 18

Conread position: 20-289
Cow position: chr8:42889039-42889300 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 47

Conread position: 20-289
Cow position: chr8:58385766-58385502 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 200
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 45, 60

Conread position: 24-289
Cow position: chr8:20684076-20683804 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 7

Conread position: 26-279
Cow position: chr8:43904872-43904630 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 16, 61

Conread position: 27-185
Cow position: chr8:10042753-10042591 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 29-276
Cow position: chr8:34132833-34133079 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 113

Conread position: 29-279
Cow position: chr8:30136015-30135765 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 51

Conread position: 31-271
Cow position: chr8:15453723-15453482 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 11, 35

Conread position: 39-279
Cow position: chr8:26229045-26228801 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 21, 120

Conread position: 39-288
Cow position: chr8:24237840-24237591 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 26, 129

Conread position: 39-289
Cow position: chr8:42138960-42139210 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 164

Conread position: 40-290
Cow position: chr8:23179457-23179709 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 113

Conread position: 44-267
Cow position: chr8:32720054-32719829 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 178

Conread position: 59-289
Cow position: chr8:40549546-40549772 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 6, 110

Conread position: 64-290
Cow position: chr8:39174181-39174411 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 163

Conread position: 67-279
Cow position: chr8:20673721-20673929 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 110

Conread position: 72-274
Cow position: chr8:39936564-39936356 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 132

Conread position: 82-288
Cow position: chr8:18395760-18395566 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 91

Conread position: 82-289
Cow position: chr8:52195965-52195754 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 167
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 125

Conread position: 85-287
Cow position: chr8:9236500-9236703 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 110

Conread position: 86-250
Cow position: chr8:33287200-33287037 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 110

Conread position: 96-286
Cow position: chr8:34410477-34410289 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 97

Conread position: 98-289
Cow position: chr8:41264332-41264141 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 105

Conread position: 103-279
Cow position: chr8:44664555-44664734 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 39, 16

Conread position: 104-279
Cow position: chr8:3433897-3433724 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 96

Conread position: 107-289
Cow position: chr8:6431501-6431318 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 23

Conread position: 117-279
Cow position: chr8:29028069-29028236 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 90

Conread position: 126-279
Cow position: chr8:29416340-29416486 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 131-289
Cow position: chr8:1840897-1841058 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 9, 38

Conread position: 137-289
Cow position: chr8:4161039-4161192 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 66

Conread position: 143-289
Cow position: chr8:35436633-35436780 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 123
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 60

Show alignments to all cow chromosomes.