Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10069H08.5 |
| Conread position: | 1-176 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-201 |
| Cow position: | |
| Alignm length: | 204 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 1-205 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 1-207 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 1-208 |
| Cow position: | |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-221 |
| Cow position: | |
| Alignm length: | 227 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 1-222 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-226 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 85, 17 |
| Conread position: | 1-230 |
| Cow position: | |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-249 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 200 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-249 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 1-264 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-264 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 201 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 1-269 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 1-271 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 41, 11 |
| Conread position: | 1-276 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 1-276 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 1-276 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-276 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 23 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 1-279 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-280 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 1-283 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-284 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 1-285 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 1-287 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 300 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 1-288 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 291 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 1-289 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 1-290 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 1-290 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 1-290 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 1-344 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 254 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 2-180 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 2-247 |
| Cow position: | |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 2-280 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 2-288 |
| Cow position: | |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 2-288 |
| Cow position: | |
| Alignm length: | 299 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 3-161 |
| Cow position: | |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 15 |
| Conread position: | 3-170 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-235 |
| Cow position: | |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-241 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-276 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-279 |
| Cow position: | |
| Alignm length: | 286 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 3-281 |
| Cow position: | |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 39, 16 |
| Conread position: | 3-287 |
| Cow position: | |
| Alignm length: | 295 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-288 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 3-289 |
| Cow position: | |
| Alignm length: | 308 |
| Alignm identity: | 228 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 5-160 |
| Cow position: | |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 5-289 |
| Cow position: | |
| Alignm length: | 302 |
| Alignm identity: | 223 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 11-286 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 15-275 |
| Cow position: | |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 48, 249 |
| Conread position: | 15-288 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 15-288 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 16-250 |
| Cow position: | |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 16-267 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 27, 134 |
| Conread position: | 16-284 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 16-289 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 26, 186 |
| Conread position: | 16-289 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 181 |
| Conread position: | 17-176 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 112 |
| Conread position: | 17-279 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 17-288 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 25, 128 |
| Conread position: | 18-215 |
| Cow position: | |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 185 |
| Conread position: | 18-279 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 92 |
| Conread position: | 18-290 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 121 |
| Conread position: | 20-284 |
| Cow position: | |
| Alignm length: | 270 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 20-289 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 21-302 |
| Cow position: | |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 18, 194 |
| Conread position: | 22-267 |
| Cow position: | |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 29 |
| Conread position: | 23-228 |
| Cow position: | |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 71 |
| Conread position: | 23-235 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 198 |
| Conread position: | 39-202 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 39-286 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 26, 161 |
| Conread position: | 39-288 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 50, 147 |
| Conread position: | 39-289 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 41-289 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 63 |
| Conread position: | 42-289 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 160 |
| Conread position: | 44-287 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 213 |
| Conread position: | 64-279 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 64-289 |
| Cow position: | |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 81, 131 |
| Conread position: | 78-298 |
| Cow position: | |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 106, 75 |
| Conread position: | 85-276 |
| Cow position: | |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 94, 110 |
| Conread position: | 98-279 |
| Cow position: | |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 106-279 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 42, 102 |
| Conread position: | 115-279 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 118-290 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 133-279 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 94, 38 |
Show alignments to all cow chromosomes.