Cow genome map


           Conread name:
           Ss1.1-Ova1-OVRM10083G01.5
        

               Conread position:
               2-256
               

               Cow position:
               chr11:74554429-74554175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               43, 38
               

               Conread position:
               2-338
               

               Cow position:
               chr11:74554933-74554594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               293, 0
               

               Conread position:
               2-366
               

               Cow position:
               chr11:74554597-74554230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               293, 0
               

               Conread position:
               4-293
               

               Cow position:
               chr11:74554763-74554474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-338
               

               Cow position:
               chr11:74554847-74554510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               207, 218
               

               Conread position:
               4-357
               

               Cow position:
               chr11:74555099-74554743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               237
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               275, 0
               

               Conread position:
               4-399
               

               Cow position:
               chr11:74554679-74554281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               272, 0
               

               Conread position:
               71-338
               

               Cow position:
               chr11:74555113-74554846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               140, 10
               
Show alignments to all cow chromosomes.