Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10083G01.5 |
| Conread position: | 2-251 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 2-251 |
| Cow position: | |
| Alignm length: | 252 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 213, 207 |
| Conread position: | 2-259 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 221, 209 |
| Conread position: | 2-259 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 213, 207 |
| Conread position: | 2-267 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 38, 5 |
| Conread position: | 2-273 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 87, 256 |
| Conread position: | 2-282 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 53, 57 |
| Conread position: | 2-283 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-283 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 219, 209 |
| Conread position: | 2-283 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-283 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 46, 51 |
| Conread position: | 2-283 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 2-283 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-284 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-284 |
| Cow position: | |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 44, 31 |
| Conread position: | 2-284 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 276, 0 |
| Conread position: | 2-289 |
| Cow position: | |
| Alignm length: | 288 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-293 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-328 |
| Cow position: | |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 2-338 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 276, 0 |
| Conread position: | 2-338 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 61, 38 |
| Conread position: | 2-340 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 227, 223 |
| Conread position: | 2-341 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 27, 49 |
| Conread position: | 2-347 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 37, 41 |
| Conread position: | 2-352 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 293, 0 |
| Conread position: | 2-355 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 207 |
| Conread position: | 2-356 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 211, 206 |
| Conread position: | 2-357 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 0 |
| Conread position: | 2-357 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 0 |
| Conread position: | 2-357 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 0 |
| Conread position: | 2-357 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 0 |
| Conread position: | 2-357 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 2-366 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 0 |
| Conread position: | 2-366 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 0 |
| Conread position: | 2-366 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 207 |
| Conread position: | 2-366 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 0 |
| Conread position: | 2-366 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 0 |
| Conread position: | 2-366 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 0 |
| Conread position: | 2-366 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 193, 121 |
| Conread position: | 2-366 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 144 |
| Conread position: | 2-366 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 140, 124 |
| Conread position: | 2-399 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 207 |
| Conread position: | 2-399 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 310 |
| Conread position: | 2-400 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 221, 213 |
| Conread position: | 3-284 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 256, 263 |
| Conread position: | 3-403 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 0 |
| Conread position: | 4-272 |
| Cow position: | |
| Alignm length: | 271 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 52 |
| Conread position: | 4-281 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 219, 207 |
| Conread position: | 4-282 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-282 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 206, 214 |
| Conread position: | 4-282 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 206, 214 |
| Conread position: | 4-283 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 217, 207 |
| Conread position: | 4-284 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 223, 211 |
| Conread position: | 4-284 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-293 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-294 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 53 |
| Conread position: | 4-327 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 125, 119 |
| Conread position: | 4-340 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 291, 0 |
| Conread position: | 4-346 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 287, 0 |
| Conread position: | 4-349 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 4-357 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 217, 211 |
| Conread position: | 4-357 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 58, 53 |
| Conread position: | 4-357 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 41 |
| Conread position: | 4-366 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 257, 262 |
| Conread position: | 4-366 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 291, 0 |
| Conread position: | 4-381 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 4-399 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 4-402 |
| Cow position: | |
| Alignm length: | 404 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 105, 132 |
| Conread position: | 5-339 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 116, 131 |
| Conread position: | 7-337 |
| Cow position: | |
| Alignm length: | 336 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 37 |
| Conread position: | 7-357 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 272, 200 |
| Conread position: | 7-372 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 8-341 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 8-357 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 54, 48 |
| Conread position: | 13-356 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 49, 44 |
| Conread position: | 13-356 |
| Cow position: | |
| Alignm length: | 349 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 200, 193 |
| Conread position: | 18-250 |
| Cow position: | |
| Alignm length: | 234 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 197, 201 |
| Conread position: | 18-258 |
| Cow position: | |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 193, 200 |
| Conread position: | 18-357 |
| Cow position: | |
| Alignm length: | 343 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 277, 0 |
| Conread position: | 19-292 |
| Cow position: | |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 192, 199 |
| Conread position: | 22-265 |
| Cow position: | |
| Alignm length: | 246 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 198, 185 |
| Conread position: | 22-267 |
| Cow position: | |
| Alignm length: | 247 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 204, 189 |
| Conread position: | 52-366 |
| Cow position: | |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 52-410 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 227, 351 |
| Conread position: | 59-282 |
| Cow position: | |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 171, 152 |
| Conread position: | 61-284 |
| Cow position: | |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 162, 147 |
| Conread position: | 69-341 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 146, 151 |
| Conread position: | 163-366 |
| Cow position: | |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 55 |
Show alignments to all cow chromosomes.