Cow genome map

Conread name: Ss1.1-Ova1-OVRM10083G01.5

Conread position: 2-251
Cow position: chr14:25836977-25837226 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 49

Conread position: 2-251
Cow position: chr14:25860534-25860783 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 213, 207

Conread position: 2-259
Cow position: chr14:25860366-25860623 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 221, 209

Conread position: 2-259
Cow position: chr14:25877585-25877842 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 167
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 213, 207

Conread position: 2-267
Cow position: chr14:3101329-3101065 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 5

Conread position: 2-273
Cow position: chr14:25794420-25794150 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 87, 256

Conread position: 2-282
Cow position: chr14:25876745-25877025 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 53, 57

Conread position: 2-283
Cow position: chr14:25783602-25783883 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-283
Cow position: chr14:25836389-25836670 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 219, 209

Conread position: 2-283
Cow position: chr14:25860198-25860479 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 179
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-283
Cow position: chr14:25876493-25876774 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 184
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 51

Conread position: 2-283
Cow position: chr14:25876829-25877110 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 180
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 41

Conread position: 2-283
Cow position: chr14:25877249-25877530 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 176
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-284
Cow position: chr14:3155988-3156270 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 2-284
Cow position: chr14:25836557-25836840 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 31

Conread position: 2-284
Cow position: chr14:25836641-25836924 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 276, 0

Conread position: 2-289
Cow position: chr14:25784442-25784729 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 2-293
Cow position: chr14:3155415-3155706 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 199
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 2-328
Cow position: chr14:25794588-25794258 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 250, 0

Conread position: 2-338
Cow position: chr14:25836137-25836476 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 225
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 276, 0

Conread position: 2-338
Cow position: chr14:25836305-25836644 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 220
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 61, 38

Conread position: 2-340
Cow position: chr14:25836053-25836394 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 222
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 227, 223

Conread position: 2-341
Cow position: chr14:25860030-25860372 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 217
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 49

Conread position: 2-347
Cow position: chr14:25794504-25794155 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 37, 41

Conread position: 2-352
Cow position: chr14:25836473-25836828 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 217
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 293, 0

Conread position: 2-355
Cow position: chr14:25784274-25784630 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 207

Conread position: 2-356
Cow position: chr14:3156072-3156429 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 211, 206

Conread position: 2-357
Cow position: chr14:25783770-25784128 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 0

Conread position: 2-357
Cow position: chr14:25783854-25784212 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 0

Conread position: 2-357
Cow position: chr14:25784190-25784548 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 0

Conread position: 2-357
Cow position: chr14:25794924-25794566 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 0

Conread position: 2-357
Cow position: chr14:25877081-25877439 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 221
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 37, 49

Conread position: 2-366
Cow position: chr14:25783434-25783801 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 0

Conread position: 2-366
Cow position: chr14:25783686-25784053 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 0

Conread position: 2-366
Cow position: chr14:25783938-25784305 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 207

Conread position: 2-366
Cow position: chr14:25784022-25784389 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 0

Conread position: 2-366
Cow position: chr14:25784106-25784473 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 0

Conread position: 2-366
Cow position: chr14:25784358-25784725 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 0

Conread position: 2-366
Cow position: chr14:25784610-25784964 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 235
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 193, 121

Conread position: 2-366
Cow position: chr14:25795092-25794725 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 144

Conread position: 2-366
Cow position: chr14:25795176-25794809 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 140, 124

Conread position: 2-399
Cow position: chr14:25783350-25783750 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 207

Conread position: 2-399
Cow position: chr14:25794756-25794356 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 310

Conread position: 2-400
Cow position: chr14:25859526-25859927 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 243
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 221, 213

Conread position: 3-284
Cow position: chr14:25859191-25859473 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 177
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 256, 263

Conread position: 3-403
Cow position: chr14:25795343-25794940 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 0

Conread position: 4-272
Cow position: chr14:447765-448033 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 52

Conread position: 4-281
Cow position: chr14:25877419-25877696 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 219, 207

Conread position: 4-282
Cow position: chr14:3080418-3080140 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 4-282
Cow position: chr14:25860452-25860730 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 179
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 206, 214

Conread position: 4-282
Cow position: chr14:25877503-25877781 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 206, 214

Conread position: 4-283
Cow position: chr14:25836223-25836502 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 217, 207

Conread position: 4-284
Cow position: chr14:3080250-3079970 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 185
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 223, 211

Conread position: 4-284
Cow position: chr14:3127762-3127482 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 194
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 4-293
Cow position: chr14:3155501-3155790 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 4-294
Cow position: chr14:447597-447887 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 53

Conread position: 4-327
Cow position: chr14:3156158-3156484 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 210
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 125, 119

Conread position: 4-340
Cow position: chr14:3127678-3127339 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 208
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 291, 0

Conread position: 4-346
Cow position: chr14:3081006-3080661 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 209
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 287, 0

Conread position: 4-349
Cow position: chr14:680819-681167 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 37

Conread position: 4-357
Cow position: chr14:3127846-3127490 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 230
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 217, 211

Conread position: 4-357
Cow position: chr14:3128098-3127742 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 222
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 58, 53

Conread position: 4-357
Cow position: chr14:25836727-25837083 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 225
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 41

Conread position: 4-366
Cow position: chr14:3080754-3080389 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 233
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 257, 262

Conread position: 4-366
Cow position: chr14:3155906-3156271 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 235
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 291, 0

Conread position: 4-381
Cow position: chr14:25859444-25859824 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 247
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 44, 50

Conread position: 4-399
Cow position: chr14:3100995-3100599 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 247
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 48, 36

Conread position: 4-402
Cow position: chr14:25895962-25896363 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 249
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 105, 132

Conread position: 5-339
Cow position: chr14:25795425-25795087 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 116, 131

Conread position: 7-337
Cow position: chr14:680906-681239 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 219
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 37

Conread position: 7-357
Cow position: chr14:25784531-25784878 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 272, 200

Conread position: 7-372
Cow position: chr14:25795255-25794887 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 43

Conread position: 8-341
Cow position: chr14:25859280-25859616 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 215
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 46

Conread position: 8-357
Cow position: chr14:25794834-25794482 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 238
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 54, 48

Conread position: 13-356
Cow position: chr14:447690-448036 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 211
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 44

Conread position: 13-356
Cow position: chr14:680744-681090 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 222
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 200, 193

Conread position: 18-250
Cow position: chr14:3156256-3156488 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 197, 201

Conread position: 18-258
Cow position: chr14:3079900-3079659 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 193, 200

Conread position: 18-357
Cow position: chr14:3080152-3079810 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 210
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 277, 0

Conread position: 19-292
Cow position: chr14:681002-681275 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 192, 199

Conread position: 22-265
Cow position: chr14:25911025-25911268 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 198, 185

Conread position: 22-267
Cow position: chr14:25895644-25895889 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 204, 189

Conread position: 52-366
Cow position: chr14:25783316-25783633 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 0

Conread position: 52-410
Cow position: chr14:25795462-25795102 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 229
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 227, 351

Conread position: 59-282
Cow position: chr14:447568-447791 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 171, 152

Conread position: 61-284
Cow position: chr14:25859837-25860061 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 151
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 162, 147

Conread position: 69-341
Cow position: chr14:25859173-25859448 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 179
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 146, 151

Conread position: 163-366
Cow position: chr14:3155408-3155614 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 55

Show alignments to all cow chromosomes.