Cow genome map


           Conread name:
           Ss1.1-Ova1-OVRM10083G01.5
        

               Conread position:
               2-259
               

               Cow position:
               chr16:14626991-14626734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               209, 218
               

               Conread position:
               2-343
               

               Cow position:
               chr16:14627159-14626815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               37, 52
               

               Conread position:
               2-357
               

               Cow position:
               chr16:14627411-14627053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               2-389
               

               Cow position:
               chr16:14627915-14627525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               46, 52
               

               Conread position:
               3-269
               

               Cow position:
               chr16:14627074-14626808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               45, 49
               

               Conread position:
               4-357
               

               Cow position:
               chr16:14627577-14627221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               44, 48
               

               Conread position:
               6-289
               

               Cow position:
               chr16:14627827-14627544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               42, 48
               

               Conread position:
               12-407
               

               Cow position:
               chr16:14627485-14627088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               36, 40
               

               Conread position:
               73-357
               

               Cow position:
               chr16:14627926-14627641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               5, 10
               
Show alignments to all cow chromosomes.