Cow genome map

Conread name: Ss1.1-Ova1-OVRM10083G01.5

Conread position: 1-357
Cow position: chr17:22452376-22452017 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 0

Conread position: 2-266
Cow position: chr17:22551754-22551490 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 208, 216

Conread position: 2-280
Cow position: chr17:22452039-22451761 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 60

Conread position: 2-281
Cow position: chr17:22473508-22473788 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 182
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 213, 219

Conread position: 2-284
Cow position: chr17:22473340-22473622 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 194
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 60, 38

Conread position: 2-284
Cow position: chr17:22589844-22589562 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 62

Conread position: 2-284
Cow position: chr17:22589928-22589646 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 190
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 52, 40

Conread position: 2-284
Cow position: chr17:22590012-22589730 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 183
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 210, 230

Conread position: 2-346
Cow position: chr17:22452207-22451860 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 48

Conread position: 2-349
Cow position: chr17:22552678-22552328 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 224
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 55

Conread position: 2-356
Cow position: chr17:22498969-22498612 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 220, 205

Conread position: 2-357
Cow position: chr17:22452291-22451933 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 220
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 278, 0

Conread position: 2-357
Cow position: chr17:22473592-22473951 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 293, 0

Conread position: 2-357
Cow position: chr17:22552090-22551732 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 221
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 276, 304

Conread position: 2-357
Cow position: chr17:22552594-22552236 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 35

Conread position: 2-357
Cow position: chr17:22552846-22552488 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 240
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 48

Conread position: 2-358
Cow position: chr17:22473424-22473783 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 228
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 38, 52

Conread position: 2-358
Cow position: chr17:22552174-22551815 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 231
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 48

Conread position: 2-365
Cow position: chr17:22499305-22498939 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 236
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 295, 0

Conread position: 2-366
Cow position: chr17:22552006-22551639 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 48

Conread position: 2-366
Cow position: chr17:22552342-22551975 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 60, 55

Conread position: 2-366
Cow position: chr17:22552930-22552563 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 228
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 207, 216

Conread position: 2-386
Cow position: chr17:22552510-22552123 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 249
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 45

Conread position: 2-410
Cow position: chr17:22499221-22498811 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 261
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 306, 376

Conread position: 3-357
Cow position: chr17:22590179-22589822 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 227
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 215, 205

Conread position: 3-366
Cow position: chr17:22499388-22499022 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 294, 0

Conread position: 4-284
Cow position: chr17:22452121-22451841 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 78, 86

Conread position: 4-339
Cow position: chr17:22552760-22552422 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 220
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 216, 207

Conread position: 4-386
Cow position: chr17:22589674-22589289 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 241
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 205, 214

Conread position: 8-281
Cow position: chr17:22473262-22473535 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 207, 213

Conread position: 12-357
Cow position: chr17:22590254-22589906 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 223
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 194, 206

Conread position: 13-289
Cow position: chr17:22590085-22589809 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 178
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 195, 205

Conread position: 20-366
Cow position: chr17:22552996-22552647 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 222
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 127, 119

Conread position: 48-281
Cow position: chr17:22452413-22452180 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 161, 148

Conread position: 51-357
Cow position: chr17:22473224-22473530 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 198
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 170, 43

Conread position: 51-366
Cow position: chr17:22499424-22499106 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 205
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 18

Show alignments to all cow chromosomes.