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Cow genome map

           
Conread name:
           
Ss1.1-Ova1-OVRM10083G01.5
        

               
Conread position:
               
1-289
               

               
Cow position:
               
chr18:51367589-51367301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
61, 57
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr18:51400369-51400662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr18:51969598-51969965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr18:42837257-42837099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr18:52448207-52448382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chr18:43053368-43053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr18:56247226-56247043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr18:41948501-41948302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr18:51367420-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr18:51765151-51764950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-203
               

               
Cow position:
               
chr18:51812121-51811920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr18:51969841-51970046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr18:51839050-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr18:51367923-51367687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr18:14453761-14453521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 50
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr18:42837341-42837101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-243
               

               
Cow position:
               
chr18:43168303-43168544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr18:44184207-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr18:43174677-43174431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 41
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr18:1418345-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
211, 206
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr18:14453113-14452856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr18:33063839-33063582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr18:52448123-52448381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
2-260
               

               
Cow position:
               
chr18:44397760-44397502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
46, 50
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr18:50058776-50058512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr18:50059112-50058848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
218, 204
               

               
Conread position:
               
2-267
               

               
Cow position:
               
chr18:43174761-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
37, 44
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr18:42792651-42792918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr18:51789466-51789196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr18:44153941-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
42, 51
               

               
Conread position:
               
2-278
               

               
Cow position:
               
chr18:50048628-50048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr18:14453197-14452918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr18:33092763-33092484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
138, 144
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr18:33092931-33092652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
60, 55
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr18:50099402-50099681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr18:51789298-51789019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr18:51812541-51812262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr18:51839386-51839107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 50
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr18:54993667-54993944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
2-281
               

               
Cow position:
               
chr18:55523651-55523930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
218, 199
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr18:42791223-42791503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
230, 205
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr18:42837425-42837145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr18:43168219-43168499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 52
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr18:50849098-50849378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr18:51367504-51367223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr18:51400791-51401072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr18:33063923-33063641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
83, 95
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr18:50848846-50849128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
205, 216
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr18:42960040-42959755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
205, 216
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr18:51400539-51400823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
228, 209
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr18:52446947-52447232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
132, 142
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr18:42674642-42674359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
220, 211
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr18:44184291-44184004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
133, 124
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr18:51368343-51368056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
209, 219
               

               
Conread position:
               
2-291
               

               
Cow position:
               
chr18:42792147-42792436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
217, 205
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr18:40075366-40075657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr18:40307016-40307307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr18:40324541-40324250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 52
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr18:50083961-50084252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr18:51874399-51874693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:52447031-52447324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
201, 216
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr18:40324205-40323905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr18:42959713-42959399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 0
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr18:50246504-50246828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr18:44397844-44397519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr18:43093159-43092833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr18:49033375-49033048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
213, 218
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr18:51752076-51751749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 93
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr18:56247473-56247149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
209, 11
               

               
Conread position:
               
2-329
               

               
Cow position:
               
chr18:44240520-44240850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
2-335
               

               
Cow position:
               
chr18:52428732-52429063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
266, 285
               

               
Conread position:
               
2-335
               

               
Cow position:
               
chr18:52433913-52434244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
266, 277
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr18:42744122-42743785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr18:40086507-40086171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr18:51400623-51400962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
60, 56
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr18:42960208-42959868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 283
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr18:43175013-43174673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 144
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr18:50271804-50272144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr18:53610040-53609700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
219, 204
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr18:53635365-53635025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
220, 206
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr18:14453845-14453504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
208, 218
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr18:33064091-33063749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr18:42791559-42791900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
308, 293
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr18:44398180-44397839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 217
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr18:51368091-51367751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr18:51368427-51368086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
132, 144
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr18:51752160-51751819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
137, 142
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr18:51789130-51788789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
210, 217
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr18:51812457-51812116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
221, 213
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr18:51874070-51874404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
2-340
               

               
Cow position:
               
chr18:51970430-51970764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 48
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr18:14453929-14453587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
213, 219
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr18:33064259-33063917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
226, 213
               

               
Conread position:
               
2-342
               

               
Cow position:
               
chr18:41198170-41198513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 209
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr18:42791811-42792155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr18:43174845-43174501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 0
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr18:43175433-43175089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 96
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr18:44184375-44184031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 0
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr18:44253884-44253540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr18:44398348-44398004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 0
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr18:50281849-50282193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 36
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr18:52447955-52448300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 289
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr18:56247808-56247465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr18:50083289-50083639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 115
               

               
Conread position:
               
2-351
               

               
Cow position:
               
chr18:41198422-41198774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
2-351
               

               
Cow position:
               
chr18:56128800-56129154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
228, 206
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr18:43022728-43022371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr18:54968129-54968486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr18:56316308-56316665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
213, 217
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:1417925-1418283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
209, 216
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:14453281-14452923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:33064343-33063985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:33064595-33064237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:40086929-40086575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
191, 154
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:40324457-40324099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
289, 0
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:42675062-42674704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:42675230-42674872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:42744626-42744268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:42791895-42792253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
218, 212
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:42791979-42792337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
139, 131
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:42792063-42792421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
209, 216
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:42792315-42792673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
207, 216
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:42837509-42837151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:42960292-42959934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 0
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:42985469-42985111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:43022812-43022454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
289, 0
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:43119896-43119538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 218
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:43120064-43119706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:43120148-43119790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 124
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:43120232-43119874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 210
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:43167799-43168157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
208, 218
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:43167883-43168241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:43167967-43168325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:43168135-43168493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:43175097-43174739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 210
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:43175181-43174823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 0
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:43175349-43174991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 0
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:44153622-44153267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:44154024-44153673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
46, 38
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:44154447-44154086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:44184459-44184101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 0
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:44184627-44184269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 0
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:44239848-44240206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 47
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:44240100-44240458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:44240268-44240626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 46
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:49032703-49032345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 0
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:50049048-50048690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 144
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:50083709-50084067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
55, 60
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:50083793-50084151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 58
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:50099486-50099844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:50099654-50100012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:50099822-50100180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:50271636-50271994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
51, 36
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:50848174-50848532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
209, 228
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:51789382-51789024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:51812373-51812015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
210, 217
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:52427808-52428166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 133
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:52432989-52433347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:52433157-52433515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 133
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:52447283-52447641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
84, 76
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:52447535-52447893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:54979651-54980009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
225, 216
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:55018055-55018413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
2-357
               

               
Cow position:
               
chr18:55523399-55523757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
2-358
               

               
Cow position:
               
chr18:42985049-42984690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
2-358
               

               
Cow position:
               
chr18:50048796-50048437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
127, 136
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr18:41197582-41197947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 209
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr18:43119812-43119448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr18:43120316-43119951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr18:49032451-49032086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 0
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr18:51765907-51765542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
300, 293
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr18:42674894-42674528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 0
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr18:42744206-42743840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 144
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr18:42837593-42837227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr18:42985385-42985019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 37
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr18:44398012-44397646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 216
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr18:49032871-49032505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr18:50250926-50251288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 32
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:33064511-33064144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 217
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:40086255-40085898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:40324793-40324426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 50
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:41197834-41198201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:41949005-41948638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 293
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:42674978-42674611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 50
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:42675314-42674947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
211, 219
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:42744290-42743923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:42744542-42744175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:42744710-42744343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 217
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:42791055-42791422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:42792399-42792766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
208, 216
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:42837761-42837394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 0
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:42837929-42837562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 0
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:43022560-43022193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:43022896-43022529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
122, 135
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:43093495-43093128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 208
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:44154276-44153910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:44184879-44184512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 132
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:50048964-50048597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
83, 91
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:50246336-50246703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:52012435-52012069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 30
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:56329424-56329057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 293
               

               
Conread position:
               
2-372
               

               
Cow position:
               
chr18:43048637-43048265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 0
               

               
Conread position:
               
2-373
               

               
Cow position:
               
chr18:41948753-41948379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr18:41949173-41948798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 293
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr18:40306596-40306976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr18:44253548-44253179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
295, 159
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr18:41197750-41198138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
208, 218
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr18:41198254-41198642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr18:44184711-44184323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 0
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr18:44253225-44252845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
203, 120
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr18:51368259-51367871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
289, 0
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr18:52447787-52448175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
2-388
               

               
Cow position:
               
chr18:51969432-51969819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 36
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr18:40306428-40306820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
2-395
               

               
Cow position:
               
chr18:42984965-42984569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr18:42744374-42743977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr18:43174929-43174532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 384
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr18:43175517-43175120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 37
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr18:52427640-52428037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr18:52428144-52428541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 203
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr18:52428396-52428793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 294
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr18:52433325-52433722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 0
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr18:52433577-52433974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 294
               

               
Conread position:
               
2-398
               

               
Cow position:
               
chr18:40086680-40086276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 79
               

               
Conread position:
               
2-398
               

               
Cow position:
               
chr18:44184795-44184396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr18:40324709-40324309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr18:41948837-41948437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 217
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr18:41949089-41948689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr18:42837677-42837277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 210
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr18:43023064-43022664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 0
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr18:43119980-43119580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 50
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr18:44154360-44153961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 47
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr18:44240352-44240752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 0
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr18:44398096-44397696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr18:44398264-44397864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 38
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr18:50246168-50246568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 49
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr18:51368596-51368195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr18:40306680-40307084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
47, 32
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr18:41198002-41198406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr18:43093663-43093259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
83, 96
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr18:43093987-43093595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr18:43175265-43174861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 144
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr18:52447367-52447771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
2-405
               

               
Cow position:
               
chr18:43093327-43092922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
2-405
               

               
Cow position:
               
chr18:51812709-51812304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr18:42744458-42744048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 401
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr18:44253800-44253390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 401
               

               
Conread position:
               
2-430
               

               
Cow position:
               
chr18:51789214-51788784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
228, 212
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr18:43022392-43021939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 399
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr18:42984881-42984396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 292
               

               
Conread position:
               
2-502
               

               
Cow position:
               
chr18:40085845-40085322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr18:40075451-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-281
               

               
Cow position:
               
chr18:55018308-55018586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr18:1418262-1418543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
208, 217
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr18:51765234-51764952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
3-286
               

               
Cow position:
               
chr18:42827580-42827863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
207, 216
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr18:40085928-40085629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
122, 134
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr18:51368510-51368172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
312, 0
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr18:52428649-52428987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 202
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr18:52433830-52434168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 202
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr18:33092846-33092503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
214, 206
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr18:40086008-40085656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 31
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr18:44397927-44397571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 218
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr18:50848343-50848699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr18:53525952-53526308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
204, 218
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr18:33065014-33064657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
72, 64
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr18:41948920-41948563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr18:51400456-51400813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr18:53509498-53509855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
205, 218
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr18:53586991-53586634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
50, 46
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr18:54979988-54980345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
218, 212
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr18:54980324-54980680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr18:54993332-54993689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
42, 47
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr18:55523568-55523925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
283, 0
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr18:40306933-40307299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 47
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr18:52427893-52428289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 43
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr18:52428061-52428457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 40
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr18:52428229-52428625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 49
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr18:52433242-52433638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
3-396
               

               
Cow position:
               
chr18:52433410-52433806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 49
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr18:52428313-52428712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr18:52428481-52428880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 0
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr18:52433494-52433893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 40
               

               
Conread position:
               
3-399
               

               
Cow position:
               
chr18:52433662-52434061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 330
               

               
Conread position:
               
3-431
               

               
Cow position:
               
chr18:51839217-51838786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr18:56494273-56494506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
228, 0
               

               
Conread position:
               
4-243
               

               
Cow position:
               
chr18:40307102-40307341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr18:49032281-49032039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr18:56316478-56316733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr18:56247308-56247053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 133
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr18:53560439-53560701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr18:53586234-53585972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr18:41948583-41948318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
257, 0
               

               
Conread position:
               
4-278
               

               
Cow position:
               
chr18:53560523-53560793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
243, 0
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr18:53509751-53510024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
223, 207
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr18:53498569-53498850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
259, 0
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr18:53526121-53526398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr18:54968215-54968492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
135, 139
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr18:55066765-55066488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 45
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr18:56330178-56329901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
44, 50
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr18:56434390-56434668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
199, 216
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr18:56493937-56494214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr18:56494189-56494466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr18:56316394-56316672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr18:53610542-53610263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
201, 214
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr18:53635951-53635672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr18:56128214-56128493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr18:53610206-53609926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
217, 204
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr18:53635867-53635587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr18:56329758-56329478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 48
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr18:56330094-56329814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
223, 210
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr18:53586318-53586033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr18:55066681-55066396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
212, 203
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:54967296-54967582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr18:56316142-56316428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
140, 130
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr18:42674724-42674400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr18:40086337-40086013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 130
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr18:42792569-42792895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
4-328
               

               
Cow position:
               
chr18:49032533-49032206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
211, 217
               

               
Conread position:
               
4-328
               

               
Cow position:
               
chr18:56329170-56328843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
288, 0
               

               
Conread position:
               
4-338
               

               
Cow position:
               
chr18:42791141-42791478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
57, 52
               

               
Conread position:
               
4-338
               

               
Cow position:
               
chr18:50848764-50849101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
217, 207
               

               
Conread position:
               
4-340
               

               
Cow position:
               
chr18:51400709-51401048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
58, 35
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr18:42985215-42984873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr18:53498146-53498492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
151, 293
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr18:56494105-56494447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
275, 0
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr18:1418179-1418524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
300, 291
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr18:53560019-53560367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr18:53560355-53560703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
196, 215
               

               
Conread position:
               
4-351
               

               
Cow position:
               
chr18:42791729-42792081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
4-354
               

               
Cow position:
               
chr18:40306850-40307203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
291, 0
               

               
Conread position:
               
4-355
               

               
Cow position:
               
chr18:53498062-53498422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
132, 123
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr18:49032617-49032262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
287, 0
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr18:52012266-52011911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
303, 0
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr18:53586486-53586131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
303, 0
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr18:55066849-55066494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
274, 0
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr18:56316226-56316581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
201, 193
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr18:56434138-56434493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
138, 122
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:1418011-1418367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
81, 94
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:22634649-22635005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:33064005-33063649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
256, 262
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:40075032-40075388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
258, 247
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:40075200-40075556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
257, 262
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:40324287-40323932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 50
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:42827497-42827853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:42985299-42984943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 37
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:44240018-44240374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:49032785-49032429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
211, 217
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:50083543-50083899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
126, 118
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:52447705-52448061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
287, 0
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:53498404-53498757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
215, 45
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:53509331-53509687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
298, 278
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:53509415-53509771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
286, 307
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:53509583-53509939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
300, 291
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:53525785-53526141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
298, 289
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:53525869-53526225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
287, 302
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:53526037-53526393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
290, 0
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:53559935-53560291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:53560187-53560543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:53586738-53586382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
204, 215
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:53635699-53635343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
208, 215
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:54967881-54968235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
288, 147
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:54967965-54968319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
287, 66
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:54979821-54980177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 52
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:54980073-54980429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
288, 0
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:54980157-54980513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
205, 216
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:54992829-54993185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
134, 140
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:54993417-54993773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
222, 190
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:54993501-54993857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
292, 0
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:54993585-54993939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:55008820-55009176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
51, 57
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:55018141-55018497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:55018393-55018750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:55066933-55066577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
286, 0
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:55067017-55066661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
49, 45
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:55523737-55524093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
274, 0
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:56329338-56328982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
44, 48
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:56329590-56329234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
287, 0
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:56493853-56494209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
302, 0
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr18:56494021-56494377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
287, 0
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr18:55009072-55009429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr18:33064677-33064312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr18:33064761-33064396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr18:40306262-40306627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
211, 216
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr18:41197500-41197865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 53
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr18:43048719-43048354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 0
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr18:50059446-50059081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
39, 35
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr18:53586402-53586037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
272, 0
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr18:53586822-53586457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
49, 45
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr18:53610374-53610009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
202, 215
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr18:53610458-53610093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
281, 0
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr18:53635447-53635082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr18:53635615-53635250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr18:56128550-56128915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr18:56329254-56328889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
211, 216
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr18:41949255-41948875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 0
               

               
Conread position:
               
4-387
               

               
Cow position:
               
chr18:52447117-52447503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
136, 118
               

               
Conread position:
               
4-387
               

               
Cow position:
               
chr18:56434222-56434608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
289, 0
               

               
Conread position:
               
4-395
               

               
Cow position:
               
chr18:49033037-49032640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
142, 135
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr18:43022474-43022079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 0
               

               
Conread position:
               
4-396
               

               
Cow position:
               
chr18:44239766-44240161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
123, 140
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr18:49022739-49023137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
139, 132
               

               
Conread position:
               
4-399
               

               
Cow position:
               
chr18:52447873-52448271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 204
               

               
Conread position:
               
4-403
               

               
Cow position:
               
chr18:52012014-52011612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 262
               

               
Conread position:
               
4-403
               

               
Cow position:
               
chr18:53560271-53560673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
58, 45
               

               
Conread position:
               
4-405
               

               
Cow position:
               
chr18:54968047-54968450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
303, 376
               

               
Conread position:
               
4-909
               

               
Cow position:
               
chr18:52011846-52010949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
919
               

               
Alignm identity:
               
717
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 356
               

               
Conread position:
               
6-290
               

               
Cow position:
               
chr18:51812201-51811917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
204, 213
               

               
Conread position:
               
6-328
               

               
Cow position:
               
chr18:42792235-42792560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
6-340
               

               
Cow position:
               
chr18:51812789-51812452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
286, 278
               

               
Conread position:
               
6-342
               

               
Cow position:
               
chr18:51788958-51788620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
204, 213
               

               
Conread position:
               
7-281
               

               
Cow position:
               
chr18:22634904-22635178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
7-281
               

               
Cow position:
               
chr18:56316061-56316335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
205, 213
               

               
Conread position:
               
7-290
               

               
Cow position:
               
chr18:54993168-54993451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-326
               

               
Cow position:
               
chr18:49022910-49023232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
214, 204
               

               
Conread position:
               
7-338
               

               
Cow position:
               
chr18:43168056-43168391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
7-340
               

               
Cow position:
               
chr18:51839297-51838961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
44, 31
               

               
Conread position:
               
7-346
               

               
Cow position:
               
chr18:53586903-53586561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
289, 0
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:40074951-40075304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
170, 162
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:42790976-42791329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:42985548-42985195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:43120395-43120042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:50059275-50058922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
284, 0
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:50848515-50848868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:52427561-52427914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
204, 212
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:52427981-52428334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 119
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:52432910-52433263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
204, 212
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:54967716-54968067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 27
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:54979572-54979925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
116, 129
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:54992748-54993101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:55008571-55008924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
116, 129
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:55017892-55018245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
205, 223
               

               
Conread position:
               
7-357
               

               
Cow position:
               
chr18:55523320-55523673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
116, 137
               

               
Conread position:
               
7-366
               

               
Cow position:
               
chr18:42791396-42791758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
222, 200
               

               
Conread position:
               
7-366
               

               
Cow position:
               
chr18:44184538-44184176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
7-366
               

               
Cow position:
               
chr18:50848599-50848961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
7-395
               

               
Cow position:
               
chr18:42837840-42837449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 139
               

               
Conread position:
               
7-395
               

               
Cow position:
               
chr18:52447624-52448015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 213
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr18:42985128-42984733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 118
               

               
Conread position:
               
7-403
               

               
Cow position:
               
chr18:40324872-40324473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
208, 214
               

               
Conread position:
               
7-405
               

               
Cow position:
               
chr18:42959951-42959559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
223, 201
               

               
Conread position:
               
7-412
               

               
Cow position:
               
chr18:44253627-44253233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 0
               

               
Conread position:
               
8-255
               

               
Cow position:
               
chr18:51751986-51751739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
138, 132
               

               
Conread position:
               
8-281
               

               
Cow position:
               
chr18:40075288-40075561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-281
               

               
Cow position:
               
chr18:56248225-56247957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
8-289
               

               
Cow position:
               
chr18:44254042-44253765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
213, 144
               

               
Conread position:
               
8-328
               

               
Cow position:
               
chr18:51969354-51969675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
304, 255
               

               
Conread position:
               
8-339
               

               
Cow position:
               
chr18:50049214-50048875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
29, 142
               

               
Conread position:
               
8-340
               

               
Cow position:
               
chr18:50848432-50848767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
8-340
               

               
Cow position:
               
chr18:51789628-51789293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
193, 211
               

               
Conread position:
               
8-357
               

               
Cow position:
               
chr18:43175670-43175327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
203, 79
               

               
Conread position:
               
8-357
               

               
Cow position:
               
chr18:44253303-44252952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 186
               

               
Conread position:
               
8-357
               

               
Cow position:
               
chr18:50098988-50099340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
209, 199
               

               
Conread position:
               
8-357
               

               
Cow position:
               
chr18:50295201-50295553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
122, 114
               

               
Conread position:
               
8-362
               

               
Cow position:
               
chr18:53509671-53510026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
34, 43
               

               
Conread position:
               
8-366
               

               
Cow position:
               
chr18:50030888-50030522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
90, 127
               

               
Conread position:
               
8-399
               

               
Cow position:
               
chr18:14454007-14453613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
9-284
               

               
Cow position:
               
chr18:42960447-42960178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr18:53497986-53498301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
269, 34
               

               
Conread position:
               
9-357
               

               
Cow position:
               
chr18:51789795-51789444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
103, 115
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr18:43175593-43175243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 0
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr18:44398424-44398074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 42
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr18:52427732-52428082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr18:53509253-53509603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
300, 0
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr18:53525707-53526057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
300, 0
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr18:56128052-56128402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
203, 209
               

               
Conread position:
               
10-365
               

               
Cow position:
               
chr18:33064839-33064480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
198, 220
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr18:53636113-53635754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
203, 208
               

               
Conread position:
               
10-396
               

               
Cow position:
               
chr18:52433081-52433470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
11-293
               

               
Cow position:
               
chr18:1417850-1418132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
64, 79
               

               
Conread position:
               
11-357
               

               
Cow position:
               
chr18:41949332-41948983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 207
               

               
Conread position:
               
11-357
               

               
Cow position:
               
chr18:42960115-42959766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
129, 135
               

               
Conread position:
               
11-366
               

               
Cow position:
               
chr18:44239941-44240299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
112, 126
               

               
Conread position:
               
12-357
               

               
Cow position:
               
chr18:42675136-42674788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 0
               

               
Conread position:
               
12-357
               

               
Cow position:
               
chr18:42791653-42792001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
132, 121
               

               
Conread position:
               
12-357
               

               
Cow position:
               
chr18:50271478-50271826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
109, 125
               

               
Conread position:
               
12-357
               

               
Cow position:
               
chr18:53559859-53560207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
12-403
               

               
Cow position:
               
chr18:33093089-33092695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
284, 0
               

               
Conread position:
               
13-266
               

               
Cow position:
               
chr18:50059605-50059352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
13-286
               

               
Cow position:
               
chr18:42827422-42827695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
198, 205
               

               
Conread position:
               
13-338
               

               
Cow position:
               
chr18:51400298-51400626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
208, 196
               

               
Conread position:
               
13-340
               

               
Cow position:
               
chr18:50848689-50849019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
197, 205
               

               
Conread position:
               
13-357
               

               
Cow position:
               
chr18:55523914-55524261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
97, 121
               

               
Conread position:
               
13-357
               

               
Cow position:
               
chr18:56329497-56329150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
13-366
               

               
Cow position:
               
chr18:56128727-56129083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
13-399
               

               
Cow position:
               
chr18:49033196-49032807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
13-407
               

               
Cow position:
               
chr18:50246431-50246827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 35
               

               
Conread position:
               
17-357
               

               
Cow position:
               
chr18:53498333-53498673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
185, 131
               

               
Conread position:
               
18-356
               

               
Cow position:
               
chr18:56128648-56128989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
267, 0
               

               
Conread position:
               
18-357
               

               
Cow position:
               
chr18:53635517-53635175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
194, 200
               

               
Conread position:
               
19-254
               

               
Cow position:
               
chr18:42827680-42827915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
19-263
               

               
Cow position:
               
chr18:43053435-43053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
121, 127
               

               
Conread position:
               
19-284
               

               
Cow position:
               
chr18:50295380-50295645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
110, 117
               

               
Conread position:
               
19-288
               

               
Cow position:
               
chr18:49023006-49023276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
259, 0
               

               
Conread position:
               
19-306
               

               
Cow position:
               
chr18:43094053-43093768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
19-341
               

               
Cow position:
               
chr18:55009003-55009328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
193, 199
               

               
Conread position:
               
19-343
               

               
Cow position:
               
chr18:50848947-50849274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
200, 195
               

               
Conread position:
               
19-356
               

               
Cow position:
               
chr18:53587059-53586719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
280, 0
               

               
Conread position:
               
19-357
               

               
Cow position:
               
chr18:40306529-40306870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
196, 201
               

               
Conread position:
               
19-357
               

               
Cow position:
               
chr18:43093727-43093389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
19-358
               

               
Cow position:
               
chr18:42675381-42675039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
275, 0
               

               
Conread position:
               
19-366
               

               
Cow position:
               
chr18:52012167-52011817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 269
               

               
Conread position:
               
19-366
               

               
Cow position:
               
chr18:56128397-56128747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
20-346
               

               
Cow position:
               
chr18:55523501-55523830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
268, 0
               

               
Conread position:
               
21-284
               

               
Cow position:
               
chr18:56329657-56329394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
194, 200
               

               
Conread position:
               
22-284
               

               
Cow position:
               
chr18:56247374-56247114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
22-399
               

               
Cow position:
               
chr18:56329824-56329444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
34-284
               

               
Cow position:
               
chr18:52012486-52012238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
103, 35
               

               
Conread position:
               
47-366
               

               
Cow position:
               
chr18:42985592-42985270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 99
               

               
Conread position:
               
47-366
               

               
Cow position:
               
chr18:43023102-43022781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
47-396
               

               
Cow position:
               
chr18:41949379-41949028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
38, 6
               

               
Conread position:
               
48-357
               

               
Cow position:
               
chr18:55018016-55018329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
12, 173
               

               
Conread position:
               
49-363
               

               
Cow position:
               
chr18:50022265-50021944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
162, 169
               

               
Conread position:
               
50-357
               

               
Cow position:
               
chr18:43175709-43175411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
245, 14
               

               
Conread position:
               
50-357
               

               
Cow position:
               
chr18:54992707-54993017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
162, 170
               

               
Conread position:
               
51-264
               

               
Cow position:
               
chr18:55018692-55018904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
51-357
               

               
Cow position:
               
chr18:54993296-54993605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 92
               

               
Conread position:
               
52-269
               

               
Cow position:
               
chr18:51969807-51970024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
52-343
               

               
Cow position:
               
chr18:44184913-44184619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
178, 161
               

               
Conread position:
               
52-357
               

               
Cow position:
               
chr18:50271602-50271910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
250, 0
               

               
Conread position:
               
52-366
               

               
Cow position:
               
chr18:42675432-42675115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
88, 96
               

               
Conread position:
               
52-366
               

               
Cow position:
               
chr18:44239730-44240047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
83, 71
               

               
Conread position:
               
52-366
               

               
Cow position:
               
chr18:53587110-53586793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
52-373
               

               
Cow position:
               
chr18:42959747-42959423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 6
               

               
Conread position:
               
52-399
               

               
Cow position:
               
chr18:44154481-44154128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
97, 163
               

               
Conread position:
               
54-399
               

               
Cow position:
               
chr18:51368628-51368279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
59-358
               

               
Cow position:
               
chr18:44398459-44398157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
219, 0
               

               
Conread position:
               
59-366
               

               
Cow position:
               
chr18:40086956-40086649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
84, 64
               

               
Conread position:
               
60-282
               

               
Cow position:
               
chr18:43167773-43167995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
61-281
               

               
Cow position:
               
chr18:51752269-51752049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
148, 157
               

               
Conread position:
               
61-284
               

               
Cow position:
               
chr18:50083516-50083739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
160, 145
               

               
Conread position:
               
61-328
               

               
Cow position:
               
chr18:51367613-51367343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
234, 0
               

               
Conread position:
               
61-328
               

               
Cow position:
               
chr18:51969323-51969593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
149, 158
               

               
Conread position:
               
61-357
               

               
Cow position:
               
chr18:54967269-54967568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
148, 160
               

               
Conread position:
               
61-357
               

               
Cow position:
               
chr18:54979794-54980093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
148, 159
               

               
Conread position:
               
61-357
               

               
Cow position:
               
chr18:55008709-55009008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
62-340
               

               
Cow position:
               
chr18:14454037-14453756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
153, 159
               

               
Conread position:
               
65-328
               

               
Cow position:
               
chr18:44253330-44253065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
232, 0
               

               
Conread position:
               
65-357
               

               
Cow position:
               
chr18:40074925-40075220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
155, 146
               

               
Conread position:
               
65-357
               

               
Cow position:
               
chr18:42827390-42827685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 155
               

               
Conread position:
               
65-357
               

               
Cow position:
               
chr18:42960313-42960018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
138, 146
               

               
Conread position:
               
66-343
               

               
Cow position:
               
chr18:43048741-43048461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 0
               

               
Conread position:
               
67-357
               

               
Cow position:
               
chr18:33093118-33092825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
151, 140
               

               
Conread position:
               
69-366
               

               
Cow position:
               
chr18:42744727-42744427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
227, 0
               

               
Conread position:
               
70-366
               

               
Cow position:
               
chr18:53635717-53635418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
145, 150
               

               
Conread position:
               
71-357
               

               
Cow position:
               
chr18:53509230-53509519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
137, 150
               

               
Conread position:
               
71-357
               

               
Cow position:
               
chr18:53525684-53525973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
130, 150
               

               
Conread position:
               
72-357
               

               
Cow position:
               
chr18:14453295-14453007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
73-292
               

               
Cow position:
               
chr18:55067116-55066897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
56, 65
               

               
Conread position:
               
82-357
               

               
Cow position:
               
chr18:56330184-56329906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
225, 0
               

               
Conread position:
               
82-366
               

               
Cow position:
               
chr18:53636125-53635838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
83-304
               

               
Cow position:
               
chr18:51969027-51969251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
84-366
               

               
Cow position:
               
chr18:41197496-41197781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
141, 146
               

               
Conread position:
               
99-343
               

               
Cow position:
               
chr18:43053439-43053192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
122, 113
               

               
Conread position:
               
133-356
               

               
Cow position:
               
chr18:40086967-40086741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 192
               

               
Conread position:
               
142-358
               

               
Cow position:
               
chr18:44398460-44398241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
166-357
               

               
Cow position:
               
chr18:43053456-43053262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 64
               
Show alignments to all cow chromosomes.