Cow genome map

Conread name: Ss1.1-Ova1-OVRM10083G01.5

Conread position: 1-302
Cow position: chr22:12432072-12431773 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 194
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 51, 33

Conread position: 2-205
Cow position: chr22:12419291-12419088 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 96

Conread position: 2-255
Cow position: chr22:12458015-12457762 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 166
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-257
Cow position: chr22:46654018-46654273 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 56

Conread position: 2-260
Cow position: chr22:12475544-12475286 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 225, 209

Conread position: 2-260
Cow position: chr22:12499715-12499973 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 225, 209

Conread position: 2-267
Cow position: chr22:12418770-12418505 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 172
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-279
Cow position: chr22:12498959-12499236 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 179
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 2-281
Cow position: chr22:11641115-11641394 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 193
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 218, 209

Conread position: 2-281
Cow position: chr22:14429903-14430182 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 60, 48

Conread position: 2-282
Cow position: chr22:12499547-12499828 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 38, 52

Conread position: 2-284
Cow position: chr22:12458350-12458069 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 202, 5

Conread position: 2-289
Cow position: chr22:12385495-12385206 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 36, 51

Conread position: 2-289
Cow position: chr22:14429820-14430106 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 190
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 220, 5

Conread position: 2-293
Cow position: chr22:12385409-12385118 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 50

Conread position: 2-293
Cow position: chr22:12432239-12431948 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 218, 208

Conread position: 2-323
Cow position: chr22:12458519-12458195 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 215
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 289, 0

Conread position: 2-333
Cow position: chr22:12430895-12430562 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 293, 330

Conread position: 2-336
Cow position: chr22:12399083-12398746 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 50, 41

Conread position: 2-338
Cow position: chr22:12385663-12385322 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 52

Conread position: 2-338
Cow position: chr22:12399755-12399416 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 300, 284

Conread position: 2-338
Cow position: chr22:12476132-12475793 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 0

Conread position: 2-338
Cow position: chr22:12499127-12499466 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 289, 0

Conread position: 2-340
Cow position: chr22:12432407-12432066 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 223
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 54

Conread position: 2-343
Cow position: chr22:12475712-12475368 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 52

Conread position: 2-346
Cow position: chr22:12385325-12384978 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 37, 49

Conread position: 2-356
Cow position: chr22:14468064-14468421 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 231
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 51, 31

Conread position: 2-357
Cow position: chr22:11640947-11641305 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 59, 54

Conread position: 2-357
Cow position: chr22:12399503-12399145 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 130

Conread position: 2-357
Cow position: chr22:12399587-12399229 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 217

Conread position: 2-357
Cow position: chr22:12399671-12399313 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 304

Conread position: 2-357
Cow position: chr22:12432323-12431965 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 48

Conread position: 2-357
Cow position: chr22:12476300-12475942 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 223
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 292, 0

Conread position: 2-357
Cow position: chr22:12499211-12499569 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 314, 0

Conread position: 2-357
Cow position: chr22:12499295-12499653 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 133, 125

Conread position: 2-357
Cow position: chr22:12499463-12499821 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 124

Conread position: 2-358
Cow position: chr22:12431147-12430788 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 233
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 199, 209

Conread position: 2-366
Cow position: chr22:12476216-12475849 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 238
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 284, 0

Conread position: 2-366
Cow position: chr22:12499043-12499410 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 284, 0

Conread position: 2-366
Cow position: chr22:14429651-14430018 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 234
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 302, 293

Conread position: 2-381
Cow position: chr22:12475964-12475582 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 125

Conread position: 2-396
Cow position: chr22:12399335-12398938 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 50

Conread position: 2-405
Cow position: chr22:12399419-12399014 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 49

Conread position: 3-282
Cow position: chr22:11666621-11666901 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 53, 31

Conread position: 3-340
Cow position: chr22:14430072-14430412 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 223
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 45

Conread position: 3-346
Cow position: chr22:12399166-12398820 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 31

Conread position: 3-357
Cow position: chr22:11701275-11701632 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 232
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 44

Conread position: 3-357
Cow position: chr22:12432154-12431797 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 222
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 36

Conread position: 3-399
Cow position: chr22:12399838-12399439 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 258
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 301, 0

Conread position: 4-260
Cow position: chr22:12385155-12384900 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 42, 30

Conread position: 4-267
Cow position: chr22:12431733-12431470 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 31

Conread position: 4-281
Cow position: chr22:12499633-12499910 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-281
Cow position: chr22:14429989-14430266 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 46

Conread position: 4-282
Cow position: chr22:12418852-12418574 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 180
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 203, 215

Conread position: 4-294
Cow position: chr22:46654356-46654646 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 182
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 140, 129

Conread position: 4-326
Cow position: chr22:12431481-12431156 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 211
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 59, 36

Conread position: 4-328
Cow position: chr22:12458097-12457770 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 211
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 282, 301

Conread position: 4-328
Cow position: chr22:12475626-12475299 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 0

Conread position: 4-329
Cow position: chr22:14468150-14468476 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 141, 128

Conread position: 4-357
Cow position: chr22:11640865-11641221 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 214

Conread position: 4-357
Cow position: chr22:12431901-12431545 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 230
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 274, 0

Conread position: 4-357
Cow position: chr22:12458265-12457909 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 236
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 218, 203

Conread position: 4-357
Cow position: chr22:12458433-12458077 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 228
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 285, 0

Conread position: 4-357
Cow position: chr22:12476046-12475690 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 48, 39

Conread position: 4-358
Cow position: chr22:12431061-12430704 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 49, 35

Conread position: 4-358
Cow position: chr22:12431313-12430956 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 233
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 288, 0

Conread position: 4-364
Cow position: chr22:12499381-12499744 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 287, 0

Conread position: 4-399
Cow position: chr22:11640697-11641095 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 253
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 287, 377

Conread position: 6-357
Cow position: chr22:12498879-12499233 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 229
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 280, 0

Conread position: 7-254
Cow position: chr22:11701447-11701694 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 132, 120

Conread position: 7-255
Cow position: chr22:12544591-12544839 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 163
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 202, 217

Conread position: 7-258
Cow position: chr22:11641204-11641455 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 220, 201

Conread position: 7-258
Cow position: chr22:11666709-11666960 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 120, 137

Conread position: 7-259
Cow position: chr22:14430664-14430916 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 27

Conread position: 7-284
Cow position: chr22:11701111-11701388 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 132, 125

Conread position: 7-337
Cow position: chr22:14430580-14430913 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 221
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 51, 40

Conread position: 7-357
Cow position: chr22:11666457-11666810 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 217, 202

Conread position: 7-357
Cow position: chr22:12431394-12431041 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 55, 27

Conread position: 7-366
Cow position: chr22:11640616-11640978 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 71

Conread position: 7-366
Cow position: chr22:12419017-12418655 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 288, 0

Conread position: 7-366
Cow position: chr22:12476379-12476017 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 232
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 288, 0

Conread position: 7-402
Cow position: chr22:12458178-12457778 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 257
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 288, 324

Conread position: 10-283
Cow position: chr22:11701198-11701472 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 112

Conread position: 10-357
Cow position: chr22:11666544-11666894 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 225
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 102, 112

Conread position: 13-284
Cow position: chr22:11701369-11701640 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 46, 36

Conread position: 13-289
Cow position: chr22:12458592-12458316 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 19-340
Cow position: chr22:11640796-11641120 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 218
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 259, 0

Conread position: 22-357
Cow position: chr22:14468000-14468338 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 218
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 294, 0

Conread position: 44-284
Cow position: chr22:14467937-14468178 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 161
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 164

Conread position: 49-283
Cow position: chr22:12432444-12432210 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 62-293
Cow position: chr22:12419315-12419084 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 62-339
Cow position: chr22:12458627-12458346 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 229, 0

Conread position: 89-357
Cow position: chr22:12399914-12399649 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 179
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 126, 75

Show alignments to all cow chromosomes.