Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10083G01.5 |
| Conread position: | 1-302 |
| Cow position: | |
| Alignm length: | 303 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 51, 33 |
| Conread position: | 2-205 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 83, 96 |
| Conread position: | 2-255 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-257 |
| Cow position: | |
| Alignm length: | 260 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 56 |
| Conread position: | 2-260 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 225, 209 |
| Conread position: | 2-260 |
| Cow position: | |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 225, 209 |
| Conread position: | 2-267 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-279 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-281 |
| Cow position: | |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 218, 209 |
| Conread position: | 2-281 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 60, 48 |
| Conread position: | 2-282 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 2-284 |
| Cow position: | |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 202, 5 |
| Conread position: | 2-289 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 2-289 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 220, 5 |
| Conread position: | 2-293 |
| Cow position: | |
| Alignm length: | 294 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 50 |
| Conread position: | 2-293 |
| Cow position: | |
| Alignm length: | 293 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 218, 208 |
| Conread position: | 2-323 |
| Cow position: | |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 289, 0 |
| Conread position: | 2-333 |
| Cow position: | |
| Alignm length: | 335 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 293, 330 |
| Conread position: | 2-336 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 50, 41 |
| Conread position: | 2-338 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 2-338 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 300, 284 |
| Conread position: | 2-338 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 0 |
| Conread position: | 2-338 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 289, 0 |
| Conread position: | 2-340 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 59, 54 |
| Conread position: | 2-343 |
| Cow position: | |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 2-346 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 2-356 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 51, 31 |
| Conread position: | 2-357 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 59, 54 |
| Conread position: | 2-357 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 130 |
| Conread position: | 2-357 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 217 |
| Conread position: | 2-357 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 304 |
| Conread position: | 2-357 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 2-357 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 292, 0 |
| Conread position: | 2-357 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 314, 0 |
| Conread position: | 2-357 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 133, 125 |
| Conread position: | 2-357 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 124 |
| Conread position: | 2-358 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 199, 209 |
| Conread position: | 2-366 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 284, 0 |
| Conread position: | 2-366 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 284, 0 |
| Conread position: | 2-366 |
| Cow position: | |
| Alignm length: | 369 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 302, 293 |
| Conread position: | 2-381 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 125 |
| Conread position: | 2-396 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 50 |
| Conread position: | 2-405 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 49 |
| Conread position: | 3-282 |
| Cow position: | |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 53, 31 |
| Conread position: | 3-340 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 3-346 |
| Cow position: | |
| Alignm length: | 350 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 3-357 |
| Cow position: | |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 3-357 |
| Cow position: | |
| Alignm length: | 360 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 3-399 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 258 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 301, 0 |
| Conread position: | 4-260 |
| Cow position: | |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 42, 30 |
| Conread position: | 4-267 |
| Cow position: | |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 41, 31 |
| Conread position: | 4-281 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-281 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 58, 46 |
| Conread position: | 4-282 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 203, 215 |
| Conread position: | 4-294 |
| Cow position: | |
| Alignm length: | 292 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 140, 129 |
| Conread position: | 4-326 |
| Cow position: | |
| Alignm length: | 327 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 4-328 |
| Cow position: | |
| Alignm length: | 329 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 282, 301 |
| Conread position: | 4-328 |
| Cow position: | |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 0 |
| Conread position: | 4-329 |
| Cow position: | |
| Alignm length: | 330 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 141, 128 |
| Conread position: | 4-357 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 214 |
| Conread position: | 4-357 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 274, 0 |
| Conread position: | 4-357 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 218, 203 |
| Conread position: | 4-357 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 285, 0 |
| Conread position: | 4-357 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 4-358 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 4-358 |
| Cow position: | |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 288, 0 |
| Conread position: | 4-364 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 287, 0 |
| Conread position: | 4-399 |
| Cow position: | |
| Alignm length: | 400 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 287, 377 |
| Conread position: | 6-357 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 280, 0 |
| Conread position: | 7-254 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 132, 120 |
| Conread position: | 7-255 |
| Cow position: | |
| Alignm length: | 251 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 202, 217 |
| Conread position: | 7-258 |
| Cow position: | |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 220, 201 |
| Conread position: | 7-258 |
| Cow position: | |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 120, 137 |
| Conread position: | 7-259 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 7-284 |
| Cow position: | |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 132, 125 |
| Conread position: | 7-337 |
| Cow position: | |
| Alignm length: | 340 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 7-357 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 217, 202 |
| Conread position: | 7-357 |
| Cow position: | |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 7-366 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 79, 71 |
| Conread position: | 7-366 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 288, 0 |
| Conread position: | 7-366 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 288, 0 |
| Conread position: | 7-402 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 288, 324 |
| Conread position: | 10-283 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 102, 112 |
| Conread position: | 10-357 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 102, 112 |
| Conread position: | 13-284 |
| Cow position: | |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 46, 36 |
| Conread position: | 13-289 |
| Cow position: | |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-340 |
| Cow position: | |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 259, 0 |
| Conread position: | 22-357 |
| Cow position: | |
| Alignm length: | 339 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 294, 0 |
| Conread position: | 44-284 |
| Cow position: | |
| Alignm length: | 245 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 164 |
| Conread position: | 49-283 |
| Cow position: | |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 62-293 |
| Cow position: | |
| Alignm length: | 232 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 62-339 |
| Cow position: | |
| Alignm length: | 282 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 89-357 |
| Cow position: | |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 126, 75 |
Show alignments to all cow chromosomes.