Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10083G01.5 |
| Conread position: | 2-209 |
| Cow position: | chr24:16986434-16986641 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-258 |
| Cow position: | chr24:17035282-17035026 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 2-267 |
| Cow position: | chr24:17013252-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 251, 0 |
| Conread position: | 2-269 |
| Cow position: | chr24:17036122-17035855 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-281 |
| Cow position: | chr24:17077753-17077474 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 60, 55 |
| Conread position: | 2-284 |
| Cow position: | chr24:17035450-17035167 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 43, 32 |
| Conread position: | 2-323 |
| Cow position: | chr24:17035366-17035042 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 2-324 |
| Cow position: | chr24:17077921-17077596 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 60, 55 |
| Conread position: | 2-338 |
| Cow position: | chr24:17035870-17035531 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 294, 0 |
| Conread position: | 2-338 |
| Cow position: | chr24:17036374-17036035 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 196, 184 |
| Conread position: | 2-340 |
| Cow position: | chr24:17036542-17036201 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 43, 38 |
| Conread position: | 2-356 |
| Cow position: | chr24:17035702-17035345 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 293, 0 |
| Conread position: | 2-356 |
| Cow position: | chr24:17078005-17077648 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 2-357 |
| Cow position: | chr24:17036038-17035680 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 2-358 |
| Cow position: | chr24:17035954-17035595 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 208, 217 |
| Conread position: | 2-358 |
| Cow position: | chr24:17070631-17070990 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 0 |
| Conread position: | 2-366 |
| Cow position: | chr24:17078089-17077722 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 223, 228 |
| Conread position: | 2-399 |
| Cow position: | chr24:17036290-17035890 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 276, 0 |
| Conread position: | 3-399 |
| Cow position: | chr24:17070548-17070947 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 42, 37 |
| Conread position: | 4-329 |
| Cow position: | chr24:17077835-17077507 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 211, 217 |
| Conread position: | 4-338 |
| Cow position: | chr24:17036204-17035867 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 41, 28 |
| Conread position: | 4-347 |
| Cow position: | chr24:17070717-17071063 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 81, 88 |
| Conread position: | 4-357 |
| Cow position: | chr24:17078255-17077899 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 224, 211 |
| Conread position: | 8-266 |
| Cow position: | chr24:17013174-17013432 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-357 |
| Cow position: | chr24:17070480-17070821 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 275, 0 |
| Conread position: | 22-357 |
| Cow position: | chr24:17078153-17077815 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 50-268 |
| Cow position: | chr24:17036410-17036192 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-357 |
| Cow position: | chr24:17078291-17077983 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 156, 167 |
| Conread position: | 66-343 |
| Cow position: | chr24:17070443-17070723 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 225, 0 |
| Conread position: | 97-343 |
| Cow position: | chr24:17013179-17013428 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 123, 111 |
Show alignments to all cow chromosomes.