Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10083G01.5 |
| Conread position: | 1-366 |
| Cow position: | chr8:46816047-46816416 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 2-203 |
| Cow position: | chr8:46817141-46817342 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 126, 117 |
| Conread position: | 2-281 |
| Cow position: | chr8:45201610-45201889 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 2-281 |
| Cow position: | chr8:45201694-45201973 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 2-281 |
| Cow position: | chr8:46816469-46816748 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 209, 216 |
| Conread position: | 2-282 |
| Cow position: | chr8:46817057-46817338 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 219, 204 |
| Conread position: | 2-284 |
| Cow position: | chr8:45201106-45201388 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 2-286 |
| Cow position: | chr8:55581414-55581698 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-328 |
| Cow position: | chr8:55581330-55581659 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 53, 44 |
| Conread position: | 2-336 |
| Cow position: | chr8:48406618-48406280 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 277, 0 |
| Conread position: | 2-338 |
| Cow position: | chr8:45201190-45201529 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 208, 216 |
| Conread position: | 2-338 |
| Cow position: | chr8:45201526-45201865 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 209, 216 |
| Conread position: | 2-338 |
| Cow position: | chr8:55580910-55581249 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 46, 52 |
| Conread position: | 2-338 |
| Cow position: | chr8:55581078-55581417 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 2-340 |
| Cow position: | chr8:48406702-48406361 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 47, 32 |
| Conread position: | 2-343 |
| Cow position: | chr8:55581246-55581590 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 37, 42 |
| Conread position: | 2-351 |
| Cow position: | chr8:48407542-48407188 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 289, 0 |
| Conread position: | 2-357 |
| Cow position: | chr8:45200938-45201296 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 50, 37 |
| Conread position: | 2-357 |
| Cow position: | chr8:45201022-45201380 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 2-357 |
| Cow position: | chr8:46816133-46816491 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 216 |
| Conread position: | 2-357 |
| Cow position: | chr8:46816217-46816575 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 37, 45 |
| Conread position: | 2-357 |
| Cow position: | chr8:46816805-46817163 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 2-357 |
| Cow position: | chr8:48406870-48406512 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 109, 131 |
| Conread position: | 2-357 |
| Cow position: | chr8:48407290-48406932 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 117 |
| Conread position: | 2-386 |
| Cow position: | chr8:55581162-55581549 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 46, 50 |
| Conread position: | 2-395 |
| Cow position: | chr8:48407206-48406810 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 213, 217 |
| Conread position: | 2-430 |
| Cow position: | chr8:46816889-46817319 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 270 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 209, 216 |
| Conread position: | 3-338 |
| Cow position: | chr8:45201275-45201613 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 291, 0 |
| Conread position: | 3-338 |
| Cow position: | chr8:48406953-48406615 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 186, 229 |
| Conread position: | 3-357 |
| Cow position: | chr8:45201359-45201716 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 237 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 34, 44 |
| Conread position: | 3-357 |
| Cow position: | chr8:46816386-46816743 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 4-277 |
| Cow position: | chr8:45201444-45201717 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 217, 207 |
| Conread position: | 4-356 |
| Cow position: | chr8:46816639-46816994 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 219, 226 |
| Conread position: | 4-358 |
| Cow position: | chr8:6957990-6957634 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 201, 208 |
| Conread position: | 7-338 |
| Cow position: | chr8:46816558-46816892 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 7-340 |
| Cow position: | chr8:46816978-46817314 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 8-338 |
| Cow position: | chr8:48407620-48407287 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 207, 212 |
| Conread position: | 9-338 |
| Cow position: | chr8:55580833-55581165 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 40, 45 |
| Conread position: | 10-357 |
| Cow position: | chr8:55581002-55581352 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 205, 210 |
| Conread position: | 16-284 |
| Cow position: | chr8:6958062-6957794 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 32, 38 |
| Conread position: | 51-357 |
| Cow position: | chr8:48407325-48407016 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 158, 168 |
| Conread position: | 103-289 |
| Cow position: | chr8:6958059-6957873 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.