Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10083G01.5 |
| Conread position: | 2-243 |
| Cow position: | chrX:29045655-29045414 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 50 |
| Conread position: | 2-281 |
| Cow position: | chrX:25324911-25324632 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 218, 209 |
| Conread position: | 2-289 |
| Cow position: | chrX:29045739-29045452 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 209, 218 |
| Conread position: | 2-337 |
| Cow position: | chrX:25324575-25324237 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 43, 32 |
| Conread position: | 2-337 |
| Cow position: | chrX:25324743-25324405 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 210, 217 |
| Conread position: | 2-343 |
| Cow position: | chrX:25310146-25310490 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 207, 218 |
| Conread position: | 2-354 |
| Cow position: | chrX:25310230-25310583 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 246 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 2-357 |
| Cow position: | chrX:25310062-25310420 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 36, 50 |
| Conread position: | 2-357 |
| Cow position: | chrX:25325163-25324805 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 211, 217 |
| Conread position: | 2-357 |
| Cow position: | chrX:25325331-25324973 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 218, 209 |
| Conread position: | 2-357 |
| Cow position: | chrX:25325751-25325393 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 206, 225 |
| Conread position: | 2-357 |
| Cow position: | chrX:29045172-29044814 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 2-363 |
| Cow position: | chrX:29045088-29044723 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 249 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 40, 50 |
| Conread position: | 2-364 |
| Cow position: | chrX:25325415-25325050 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 28, 44 |
| Conread position: | 2-366 |
| Cow position: | chrX:25325247-25324880 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 210, 217 |
| Conread position: | 2-366 |
| Cow position: | chrX:25325583-25325216 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 305, 286 |
| Conread position: | 2-396 |
| Cow position: | chrX:25325079-25324679 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 268 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 219, 205 |
| Conread position: | 3-268 |
| Cow position: | chrX:29044919-29044654 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 225, 207 |
| Conread position: | 3-286 |
| Cow position: | chrX:25309811-25310094 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 200, 218 |
| Conread position: | 4-291 |
| Cow position: | chrX:13826858-13826571 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 50 |
| Conread position: | 4-313 |
| Cow position: | chrX:13826522-13826211 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 213, 206 |
| Conread position: | 4-338 |
| Cow position: | chrX:25309896-25310233 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 208, 216 |
| Conread position: | 6-365 |
| Cow position: | chrX:12627279-12627640 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 215, 199 |
| Conread position: | 7-338 |
| Cow position: | chrX:25324822-25324488 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 7-358 |
| Cow position: | chrX:29045251-29044897 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 204, 213 |
| Conread position: | 11-343 |
| Cow position: | chrX:25309735-25310070 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 19-357 |
| Cow position: | chrX:29045806-29045465 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 24-357 |
| Cow position: | chrX:29045318-29044982 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 62-298 |
| Cow position: | chrX:12627837-12628071 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 162, 168 |
| Conread position: | 67-281 |
| Cow position: | chrX:25309707-25309921 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 23, 31 |
| Conread position: | 71-356 |
| Cow position: | chrX:25325598-25325310 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 140, 148 |
Show alignments to all cow chromosomes.