Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10106F11.5 |
| Conread position: | 1-156 |
| Cow position: | chr12:43484412-43484570 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 143 |
| Conread position: | 1-168 |
| Cow position: | chr12:19215847-19216012 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 94 |
| Conread position: | 1-171 |
| Cow position: | chr12:37883697-37883866 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 54 |
| Conread position: | 1-172 |
| Cow position: | chr12:14164755-14164579 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 65, 171 |
| Conread position: | 1-172 |
| Cow position: | chr12:46932348-46932524 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 2-174 |
| Cow position: | chr12:35834370-35834543 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 66, 108 |
| Conread position: | 2-180 |
| Cow position: | chr12:40879883-40880063 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 120 |
| Conread position: | 3-168 |
| Cow position: | chr12:45460014-45460180 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 79 |
| Conread position: | 4-149 |
| Cow position: | chr12:37891254-37891108 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 4-152 |
| Cow position: | chr12:9578534-9578384 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 5-169 |
| Cow position: | chr12:6973664-6973825 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 5-169 |
| Cow position: | chr12:29772797-29772631 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 6-156 |
| Cow position: | chr12:41918336-41918487 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 6-165 |
| Cow position: | chr12:14679877-14679715 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 6-172 |
| Cow position: | chr12:33250212-33250382 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-143 |
| Cow position: | chr12:13947926-13947786 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 7-149 |
| Cow position: | chr12:29466337-29466484 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-171 |
| Cow position: | chr12:30237216-30237382 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 8-179 |
| Cow position: | chr12:9616433-9616262 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 58, 81 |
| Conread position: | 11-169 |
| Cow position: | chr12:9526172-9526001 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 15-176 |
| Cow position: | chr12:21136247-21136086 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 35 |
| Conread position: | 16-179 |
| Cow position: | chr12:5602199-5602365 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 18-171 |
| Cow position: | chr12:28418647-28418494 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 21-142 |
| Cow position: | chr12:19092791-19092914 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 22-172 |
| Cow position: | chr12:45730811-45730963 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 24-171 |
| Cow position: | chr12:11553470-11553624 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 27-174 |
| Cow position: | chr12:16855881-16856030 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 19 |
| Conread position: | 35-176 |
| Cow position: | chr12:12955284-12955427 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.