Cow genome map

Conread name: Ss1.1-Ova1-OVRM10106F11.5

Conread position: 1-154
Cow position: chr13:42780441-42780294 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 1-156
Cow position: chr13:55778509-55778352 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 35

Conread position: 1-168
Cow position: chr13:29726158-29725990 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 92

Conread position: 1-171
Cow position: chr13:20855724-20855560 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 70, 33

Conread position: 1-171
Cow position: chr13:55817782-55817611 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 63, 92

Conread position: 1-172
Cow position: chr13:14824886-14824712 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 1-173
Cow position: chr13:39745658-39745828 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 65, 101

Conread position: 1-173
Cow position: chr13:41686704-41686538 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 149, 45

Conread position: 2-152
Cow position: chr13:56916203-56916355 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 129
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 62, 13

Conread position: 2-156
Cow position: chr13:48964302-48964150 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 130
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 96, 55

Conread position: 2-169
Cow position: chr13:41328112-41328276 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 64, 46

Conread position: 2-174
Cow position: chr13:1165616-1165442 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 67, 0

Conread position: 2-176
Cow position: chr13:3164882-3164702 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 59

Conread position: 3-152
Cow position: chr13:44586276-44586131 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 41

Conread position: 3-171
Cow position: chr13:505367-505197 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 129

Conread position: 3-171
Cow position: chr13:17112380-17112212 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 65, 54

Conread position: 3-171
Cow position: chr13:18850651-18850478 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 3-171
Cow position: chr13:20296825-20296994 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 42

Conread position: 3-172
Cow position: chr13:16136364-16136537 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 3-175
Cow position: chr13:50531910-50531736 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 3-188
Cow position: chr13:46515473-46515285 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 44

Conread position: 4-135
Cow position: chr13:21292376-21292245 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 12

Conread position: 4-138
Cow position: chr13:45171539-45171673 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 29

Conread position: 4-156
Cow position: chr13:4184435-4184281 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 62, 0

Conread position: 4-156
Cow position: chr13:42341637-42341791 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 4-168
Cow position: chr13:16653547-16653387 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 4-172
Cow position: chr13:47295546-47295378 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 93

Conread position: 4-183
Cow position: chr13:45230249-45230072 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 99

Conread position: 5-124
Cow position: chr13:16925272-16925154 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 17

Conread position: 5-156
Cow position: chr13:20092108-20091963 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 5-158
Cow position: chr13:15371837-15371683 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 59, 88

Conread position: 5-171
Cow position: chr13:31841805-31841969 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 26

Conread position: 5-173
Cow position: chr13:25977853-25977685 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 76

Conread position: 5-175
Cow position: chr13:34082374-34082207 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 43

Conread position: 5-176
Cow position: chr13:26484756-26484583 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 5-180
Cow position: chr13:42370530-42370705 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 80

Conread position: 6-168
Cow position: chr13:6187055-6186896 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 52

Conread position: 6-168
Cow position: chr13:33627811-33627651 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 6-179
Cow position: chr13:26210618-26210444 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 156

Conread position: 7-166
Cow position: chr13:14527802-14527963 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 57, 110

Conread position: 8-173
Cow position: chr13:31860271-31860107 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 24

Conread position: 11-165
Cow position: chr13:14122522-14122683 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 11-171
Cow position: chr13:42599080-42598918 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 57, 85

Conread position: 14-166
Cow position: chr13:2885455-2885600 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 48, 0

Conread position: 14-189
Cow position: chr13:21042228-21042048 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 19-158
Cow position: chr13:48407935-48408073 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 46

Conread position: 27-145
Cow position: chr13:58440915-58440797 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 8, 103

Conread position: 36-174
Cow position: chr13:51789575-51789712 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 8

Show alignments to all cow chromosomes.