Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10106F11.5 |
| Conread position: | 1-135 |
| Cow position: | chr14:40429197-40429060 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-145 |
| Cow position: | chr14:6859404-6859550 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-148 |
| Cow position: | chr14:37201445-37201593 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 1-166 |
| Cow position: | chr14:11562549-11562714 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 1-168 |
| Cow position: | chr14:11491631-11491801 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 63, 15 |
| Conread position: | 1-171 |
| Cow position: | chr14:13831915-13831747 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 65, 27 |
| Conread position: | 1-173 |
| Cow position: | chr14:39302866-39303039 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 65, 143 |
| Conread position: | 1-175 |
| Cow position: | chr14:48215803-48215627 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-180 |
| Cow position: | chr14:22239611-22239434 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 65, 16 |
| Conread position: | 1-181 |
| Cow position: | chr14:35271104-35271289 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 129 |
| Conread position: | 1-182 |
| Cow position: | chr14:25704318-25704502 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 65, 91 |
| Conread position: | 1-184 |
| Cow position: | chr14:4527471-4527651 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 69, 89 |
| Conread position: | 2-145 |
| Cow position: | chr14:36791909-36791765 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 2-171 |
| Cow position: | chr14:6909504-6909330 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 48, 95 |
| Conread position: | 2-171 |
| Cow position: | chr14:38892190-38892016 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 3-134 |
| Cow position: | chr14:4337932-4337799 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 3-158 |
| Cow position: | chr14:26057221-26057052 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 3-161 |
| Cow position: | chr14:35365045-35364887 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 63, 144 |
| Conread position: | 3-173 |
| Cow position: | chr14:34216369-34216197 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 4-153 |
| Cow position: | chr14:5412041-5411892 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-159 |
| Cow position: | chr14:19257431-19257277 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 123, 36 |
| Conread position: | 4-166 |
| Cow position: | chr14:30502356-30502192 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 4-168 |
| Cow position: | chr14:19004730-19004569 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 4-172 |
| Cow position: | chr14:5404374-5404206 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-172 |
| Cow position: | chr14:24687237-24687413 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 134 |
| Conread position: | 4-173 |
| Cow position: | chr14:35032851-35032681 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 68, 90 |
| Conread position: | 4-173 |
| Cow position: | chr14:41725349-41725522 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 125 |
| Conread position: | 4-175 |
| Cow position: | chr14:22313146-22312977 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 47 |
| Conread position: | 5-175 |
| Cow position: | chr14:16334798-16334969 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 61, 32 |
| Conread position: | 5-178 |
| Cow position: | chr14:3503715-3503887 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 8 |
| Conread position: | 5-178 |
| Cow position: | chr14:17780119-17780292 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 5-206 |
| Cow position: | chr14:33241281-33241079 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 59, 107 |
| Conread position: | 6-166 |
| Cow position: | chr14:49632928-49633090 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 6-171 |
| Cow position: | chr14:38066906-38067066 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 59, 97 |
| Conread position: | 6-182 |
| Cow position: | chr14:38062769-38062597 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 60, 29 |
| Conread position: | 8-171 |
| Cow position: | chr14:12784996-12784837 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 28 |
| Conread position: | 14-174 |
| Cow position: | chr14:1833141-1832979 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 24-171 |
| Cow position: | chr14:37014046-37013897 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 65-173 |
| Cow position: | chr14:38048744-38048638 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.