Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10106F11.5 |
| Conread position: | 1-152 |
| Cow position: | chr15:41192750-41192903 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 63, 108 |
| Conread position: | 1-156 |
| Cow position: | chr15:19926793-19926948 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 1-171 |
| Cow position: | chr15:18231193-18231370 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 1-172 |
| Cow position: | chr15:48870363-48870192 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 67, 101 |
| Conread position: | 1-173 |
| Cow position: | chr15:10829262-10829435 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 65, 152 |
| Conread position: | 1-179 |
| Cow position: | chr15:20081058-20080874 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 53 |
| Conread position: | 2-168 |
| Cow position: | chr15:547521-547684 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 2-174 |
| Cow position: | chr15:31408925-31409094 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 117 |
| Conread position: | 2-175 |
| Cow position: | chr15:34715544-34715370 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 63, 91 |
| Conread position: | 3-139 |
| Cow position: | chr15:33154503-33154637 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 61, 14 |
| Conread position: | 3-156 |
| Cow position: | chr15:11649815-11649969 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 61, 119 |
| Conread position: | 3-168 |
| Cow position: | chr15:35219753-35219920 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 3-185 |
| Cow position: | chr15:34515146-34515331 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 4-158 |
| Cow position: | chr15:40300670-40300513 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 39 |
| Conread position: | 4-177 |
| Cow position: | chr15:38540421-38540246 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 43, 88 |
| Conread position: | 5-145 |
| Cow position: | chr15:27395101-27394960 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 5-146 |
| Cow position: | chr15:39035839-39035696 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 5-177 |
| Cow position: | chr15:9741091-9741258 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 5-187 |
| Cow position: | chr15:26444655-26444478 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 6-157 |
| Cow position: | chr15:42479436-42479589 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 59, 126 |
| Conread position: | 6-181 |
| Cow position: | chr15:40347821-40348001 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 6-189 |
| Cow position: | chr15:19783005-19782824 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 170, 57 |
| Conread position: | 6-196 |
| Cow position: | chr15:47443939-47444124 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 58, 89 |
| Conread position: | 11-156 |
| Cow position: | chr15:18044099-18043954 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 52, 92 |
| Conread position: | 14-172 |
| Cow position: | chr15:14373323-14373158 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 50, 89 |
| Conread position: | 27-179 |
| Cow position: | chr15:21439329-21439477 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 74 |
| Conread position: | 27-187 |
| Cow position: | chr15:36442496-36442654 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 30-178 |
| Cow position: | chr15:24649797-24649945 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 35-197 |
| Cow position: | chr15:10396581-10396745 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 140 |
Show alignments to all cow chromosomes.