Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10106F11.5 |
| Conread position: | 1-156 |
| Cow position: | chr16:47237505-47237663 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-168 |
| Cow position: | chr16:50928650-50928481 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-171 |
| Cow position: | chr16:11354543-11354709 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 94 |
| Conread position: | 1-171 |
| Cow position: | chr16:28424047-28424221 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-172 |
| Cow position: | chr16:50816441-50816611 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 1-173 |
| Cow position: | chr16:35159752-35159922 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 62, 81 |
| Conread position: | 2-169 |
| Cow position: | chr16:12729229-12729401 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 3-108 |
| Cow position: | chr16:39398586-39398693 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 3-145 |
| Cow position: | chr16:42338210-42338073 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 3-171 |
| Cow position: | chr16:2537853-2538020 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 61, 87 |
| Conread position: | 3-179 |
| Cow position: | chr16:11588539-11588715 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 66, 86 |
| Conread position: | 4-95 |
| Cow position: | chr16:11044906-11044998 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 4-162 |
| Cow position: | chr16:22769968-22770129 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 4-162 |
| Cow position: | chr16:31732137-31731977 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 4-168 |
| Cow position: | chr16:22606937-22607104 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 5-144 |
| Cow position: | chr16:44753779-44753640 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 23 |
| Conread position: | 5-156 |
| Cow position: | chr16:33149717-33149571 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 78 |
| Conread position: | 5-157 |
| Cow position: | chr16:13411458-13411298 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 124 |
| Conread position: | 5-158 |
| Cow position: | chr16:24890407-24890565 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 5-166 |
| Cow position: | chr16:15483191-15483034 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 32 |
| Conread position: | 5-168 |
| Cow position: | chr16:18768048-18768213 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 5-171 |
| Cow position: | chr16:11336119-11336291 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 5-171 |
| Cow position: | chr16:13316667-13316508 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 5-171 |
| Cow position: | chr16:40884779-40884947 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 5-173 |
| Cow position: | chr16:30906447-30906284 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 84, 46 |
| Conread position: | 5-175 |
| Cow position: | chr16:13816183-13816356 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 5-179 |
| Cow position: | chr16:38332110-38331933 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 6-158 |
| Cow position: | chr16:51984846-51984999 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 60, 45 |
| Conread position: | 6-171 |
| Cow position: | chr16:37364969-37365137 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 6-173 |
| Cow position: | chr16:40664929-40664759 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 7-171 |
| Cow position: | chr16:15318848-15318689 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 15-141 |
| Cow position: | chr16:23006935-23006811 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 36-176 |
| Cow position: | chr16:5057685-5057828 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 37-173 |
| Cow position: | chr16:9592158-9592294 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 56 |
| Conread position: | 52-174 |
| Cow position: | chr16:53269691-53269566 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 65-183 |
| Cow position: | chr16:42288131-42288248 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
Show alignments to all cow chromosomes.