Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10106F11.5 |
| Conread position: | 1-158 |
| Cow position: | chr17:4807877-4807712 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-171 |
| Cow position: | chr17:25568046-25568211 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 73, 54 |
| Conread position: | 1-172 |
| Cow position: | chr17:18837860-18837690 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 2-116 |
| Cow position: | chr17:34753497-34753613 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 2-124 |
| Cow position: | chr17:7963035-7963158 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 2-144 |
| Cow position: | chr17:6873458-6873313 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 90 |
| Conread position: | 2-156 |
| Cow position: | chr17:21896201-21896355 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 89 |
| Conread position: | 2-166 |
| Cow position: | chr17:43936844-43936679 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 68, 129 |
| Conread position: | 2-175 |
| Cow position: | chr17:20638453-20638270 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 90 |
| Conread position: | 2-177 |
| Cow position: | chr17:20474767-20474939 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 3-168 |
| Cow position: | chr17:33981961-33981793 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 4-165 |
| Cow position: | chr17:42754366-42754198 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 4-172 |
| Cow position: | chr17:13503161-13503332 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 4-172 |
| Cow position: | chr17:29659397-29659233 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 4-178 |
| Cow position: | chr17:20010030-20009854 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 62, 80 |
| Conread position: | 5-135 |
| Cow position: | chr17:27989553-27989422 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 6-171 |
| Cow position: | chr17:14295698-14295863 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 7-145 |
| Cow position: | chr17:7848272-7848132 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-168 |
| Cow position: | chr17:11902095-11901929 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 8-128 |
| Cow position: | chr17:30493044-30492927 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 38-192 |
| Cow position: | chr17:10884270-10884426 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 63-181 |
| Cow position: | chr17:661343-661461 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 29 |
Show alignments to all cow chromosomes.