Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10106F11.5 |
| Conread position: | 1-121 |
| Cow position: | chr19:16058137-16058015 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-138 |
| Cow position: | chr19:54303149-54303011 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 64, 27 |
| Conread position: | 1-156 |
| Cow position: | chr19:8894114-8893965 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 55 |
| Conread position: | 1-156 |
| Cow position: | chr19:36961899-36962056 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-168 |
| Cow position: | chr19:55205442-55205603 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 1-171 |
| Cow position: | chr19:15990919-15991088 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-171 |
| Cow position: | chr19:22764553-22764396 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-174 |
| Cow position: | chr19:2863564-2863389 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-185 |
| Cow position: | chr19:12359331-12359517 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-198 |
| Cow position: | chr19:38262652-38262460 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 2-119 |
| Cow position: | chr19:21548320-21548204 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 2-156 |
| Cow position: | chr19:24912941-24913098 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 113 |
| Conread position: | 2-167 |
| Cow position: | chr19:6951160-6950997 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 2-168 |
| Cow position: | chr19:2446651-2446819 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 3-145 |
| Cow position: | chr19:36795284-36795148 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 3-169 |
| Cow position: | chr19:50627907-50628081 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 25 |
| Conread position: | 3-171 |
| Cow position: | chr19:45703216-45703054 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 155, 101 |
| Conread position: | 4-156 |
| Cow position: | chr19:7025709-7025554 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 4-167 |
| Cow position: | chr19:13465890-13466056 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 4-171 |
| Cow position: | chr19:42982499-42982330 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 4-174 |
| Cow position: | chr19:21278473-21278301 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 4-187 |
| Cow position: | chr19:29986298-29986114 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 174 |
| Conread position: | 5-156 |
| Cow position: | chr19:41839164-41839018 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 5-166 |
| Cow position: | chr19:19850769-19850930 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 42 |
| Conread position: | 5-168 |
| Cow position: | chr19:16825726-16825569 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 5-171 |
| Cow position: | chr19:32843773-32843602 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 15-139 |
| Cow position: | chr19:4757277-4757151 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 15-152 |
| Cow position: | chr19:12371154-12371015 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 53, 123 |
| Conread position: | 15-175 |
| Cow position: | chr19:36323162-36323329 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 16-183 |
| Cow position: | chr19:14221006-14220837 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 96 |
| Conread position: | 22-171 |
| Cow position: | chr19:21785583-21785732 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 133 |
| Conread position: | 22-171 |
| Cow position: | chr19:42210317-42210466 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 24-188 |
| Cow position: | chr19:13268146-13268306 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 33-173 |
| Cow position: | chr19:9546398-9546258 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 96 |
| Conread position: | 33-181 |
| Cow position: | chr19:16858744-16858600 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 60 |
| Conread position: | 39-172 |
| Cow position: | chr19:29415382-29415517 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 111 |
Show alignments to all cow chromosomes.