Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10106F11.5 |
| Conread position: | 1-136 |
| Cow position: | |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1-139 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 92 |
| Conread position: | 1-158 |
| Cow position: | |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 33 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 63, 82 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-171 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 20 |
| Conread position: | 1-181 |
| Cow position: | |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 95, 16 |
| Conread position: | 2-144 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-145 |
| Cow position: | |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 2-145 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 2-145 |
| Cow position: | |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 86, 15 |
| Conread position: | 2-170 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 2-171 |
| Cow position: | |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 83 |
| Conread position: | 2-173 |
| Cow position: | |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 62, 118 |
| Conread position: | 2-183 |
| Cow position: | |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 62, 115 |
| Conread position: | 3-110 |
| Cow position: | |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 3-147 |
| Cow position: | |
| Alignm length: | 151 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 3-168 |
| Cow position: | |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 3-168 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 116 |
| Conread position: | 3-168 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 3-172 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 3-174 |
| Cow position: | |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 64, 97 |
| Conread position: | 4-110 |
| Cow position: | |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 4-156 |
| Cow position: | |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 62, 53 |
| Conread position: | 4-158 |
| Cow position: | |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 72 |
| Conread position: | 4-169 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 124 |
| Conread position: | 4-171 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 4-171 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 4-171 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 4-171 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 35 |
| Conread position: | 4-171 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 4-180 |
| Cow position: | |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 4-181 |
| Cow position: | |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 4-181 |
| Cow position: | |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 5-142 |
| Cow position: | |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 5-152 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 58, 121 |
| Conread position: | 5-152 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 58, 121 |
| Conread position: | 5-152 |
| Cow position: | |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 5-152 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 5-156 |
| Cow position: | |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-168 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 5-171 |
| Cow position: | |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 5-171 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 58, 86 |
| Conread position: | 5-171 |
| Cow position: | |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 58, 86 |
| Conread position: | 5-172 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 5-173 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 5-174 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 12 |
| Conread position: | 5-174 |
| Cow position: | |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 5-207 |
| Cow position: | |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 186, 94 |
| Conread position: | 6-152 |
| Cow position: | |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 60, 79 |
| Conread position: | 6-173 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 27 |
| Conread position: | 6-173 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 6-174 |
| Cow position: | |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 57, 84 |
| Conread position: | 6-175 |
| Cow position: | |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 7-181 |
| Cow position: | |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 8-174 |
| Cow position: | |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 55, 90 |
| Conread position: | 11-174 |
| Cow position: | |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 50, 132 |
| Conread position: | 14-156 |
| Cow position: | |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 15-156 |
| Cow position: | |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 63-175 |
| Cow position: | |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
Show alignments to all cow chromosomes.