Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10106F11.5 |
| Conread position: | 1-134 |
| Cow position: | chr24:24485855-24485720 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 83 |
| Conread position: | 1-141 |
| Cow position: | chr24:31013439-31013303 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 1-156 |
| Cow position: | chr24:405395-405552 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 1-171 |
| Cow position: | chr24:23636533-23636366 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 43 |
| Conread position: | 1-171 |
| Cow position: | chr24:39578840-39579009 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 67, 96 |
| Conread position: | 1-175 |
| Cow position: | chr24:26250001-26250174 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 81 |
| Conread position: | 3-143 |
| Cow position: | chr24:24865673-24865818 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 3-158 |
| Cow position: | chr24:5731506-5731660 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 3-166 |
| Cow position: | chr24:806176-806341 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 4-167 |
| Cow position: | chr24:27649771-27649610 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 4-171 |
| Cow position: | chr24:32344544-32344379 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 40 |
| Conread position: | 4-172 |
| Cow position: | chr24:26396030-26396200 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 5-158 |
| Cow position: | chr24:35361957-35362113 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 5-165 |
| Cow position: | chr24:18362144-18361985 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 61, 31 |
| Conread position: | 5-189 |
| Cow position: | chr24:14708285-14708460 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 30 |
| Conread position: | 6-171 |
| Cow position: | chr24:34545928-34546097 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 8-145 |
| Cow position: | chr24:17859884-17859746 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 16-173 |
| Cow position: | chr24:26625617-26625768 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 17-135 |
| Cow position: | chr24:44855608-44855725 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 17-170 |
| Cow position: | chr24:17105871-17106020 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 25-152 |
| Cow position: | chr24:29073461-29073332 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 27-171 |
| Cow position: | chr24:39175991-39175847 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.