Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10106F11.5 |
| Conread position: | 1-152 |
| Cow position: | chr25:19384574-19384421 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 1-168 |
| Cow position: | chr25:38619623-38619791 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 47, 149 |
| Conread position: | 1-173 |
| Cow position: | chr25:11389176-11389001 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 1-173 |
| Cow position: | chr25:26691776-26691602 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 1-178 |
| Cow position: | chr25:35373632-35373811 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 68, 15 |
| Conread position: | 2-168 |
| Cow position: | chr25:16472321-16472153 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 10, 152 |
| Conread position: | 2-172 |
| Cow position: | chr25:36906182-36906349 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 72, 19 |
| Conread position: | 2-175 |
| Cow position: | chr25:32002412-32002585 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 113 |
| Conread position: | 3-108 |
| Cow position: | chr25:12506759-12506867 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 3-144 |
| Cow position: | chr25:16706462-16706605 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 67, 48 |
| Conread position: | 3-156 |
| Cow position: | chr25:16087543-16087693 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 35 |
| Conread position: | 3-167 |
| Cow position: | chr25:16897436-16897603 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 3-171 |
| Cow position: | chr25:30489076-30488915 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 98, 48 |
| Conread position: | 3-178 |
| Cow position: | chr25:34498655-34498830 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 168, 117 |
| Conread position: | 4-153 |
| Cow position: | chr25:22633105-22633252 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 4-168 |
| Cow position: | chr25:12880432-12880267 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 4-173 |
| Cow position: | chr25:14283752-14283582 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 59, 97 |
| Conread position: | 5-144 |
| Cow position: | chr25:12178470-12178329 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 5-168 |
| Cow position: | chr25:21293023-21293179 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 5-171 |
| Cow position: | chr25:15460031-15459860 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 6-151 |
| Cow position: | chr25:12675944-12675795 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 6-152 |
| Cow position: | chr25:18670486-18670630 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 8-124 |
| Cow position: | chr25:4696370-4696254 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-177 |
| Cow position: | chr25:24103123-24102955 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 18-158 |
| Cow position: | chr25:12342625-12342485 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 23-168 |
| Cow position: | chr25:4671729-4671874 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 67 |
| Conread position: | 33-171 |
| Cow position: | chr25:15304866-15305007 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 40-172 |
| Cow position: | chr25:35088613-35088480 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 71 |
Show alignments to all cow chromosomes.