Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10106F11.5 |
| Conread position: | 1-138 |
| Cow position: | chr28:30309612-30309749 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 65, 102 |
| Conread position: | 1-155 |
| Cow position: | chr28:30574266-30574423 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-171 |
| Cow position: | chr28:23181100-23181270 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 1-172 |
| Cow position: | chr28:31272114-31272285 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 69, 32 |
| Conread position: | 2-152 |
| Cow position: | chr28:10069299-10069452 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 2-166 |
| Cow position: | chr28:17291164-17290998 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 2-171 |
| Cow position: | chr28:4118838-4119007 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 62, 89 |
| Conread position: | 2-174 |
| Cow position: | chr28:33200582-33200414 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 2-178 |
| Cow position: | chr28:9870046-9870223 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 92 |
| Conread position: | 2-181 |
| Cow position: | chr28:23167422-23167603 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 15, 175 |
| Conread position: | 3-168 |
| Cow position: | chr28:14622253-14622419 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 138 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 63, 91 |
| Conread position: | 3-175 |
| Cow position: | chr28:24563921-24563747 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 61, 13 |
| Conread position: | 3-185 |
| Cow position: | chr28:23665565-23665747 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 3-186 |
| Cow position: | chr28:31443093-31442904 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 103 |
| Conread position: | 4-173 |
| Cow position: | chr28:16465119-16464951 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 5-158 |
| Cow position: | chr28:611874-611721 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 61, 143 |
| Conread position: | 5-174 |
| Cow position: | chr28:33854130-33853959 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 5-185 |
| Cow position: | chr28:22574787-22574611 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 6-158 |
| Cow position: | chr28:19294706-19294857 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 11-171 |
| Cow position: | chr28:11874592-11874435 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 63, 13 |
| Conread position: | 14-168 |
| Cow position: | chr28:23892405-23892561 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 14-181 |
| Cow position: | chr28:26079935-26080098 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 18-183 |
| Cow position: | chr28:34404252-34404413 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 22-166 |
| Cow position: | chr28:8131093-8130948 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 28-171 |
| Cow position: | chr28:32360809-32360666 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 61 |
| Conread position: | 72-156 |
| Cow position: | chr28:20902164-20902080 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 74 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.