Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10106F11.5 |
| Conread position: | 1-108 |
| Cow position: | chr8:20808000-20808107 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 1-156 |
| Cow position: | chr8:19512900-19512745 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-168 |
| Cow position: | chr8:9159471-9159636 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 64, 97 |
| Conread position: | 1-168 |
| Cow position: | chr8:57191980-57191810 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-171 |
| Cow position: | chr8:12067887-12067715 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-171 |
| Cow position: | chr8:20348509-20348337 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 138 |
| Conread position: | 1-175 |
| Cow position: | chr8:8017183-8017358 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 1-175 |
| Cow position: | chr8:45527245-45527075 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 1-188 |
| Cow position: | chr8:682767-682957 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 2-144 |
| Cow position: | chr8:19678294-19678440 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 2-152 |
| Cow position: | chr8:13244089-13244238 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 2-168 |
| Cow position: | chr8:53730844-53731013 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 2-171 |
| Cow position: | chr8:20924208-20924375 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 61, 97 |
| Conread position: | 2-183 |
| Cow position: | chr8:43166750-43166932 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 3-158 |
| Cow position: | chr8:19153128-19153284 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 90 |
| Conread position: | 3-159 |
| Cow position: | chr8:5806734-5806577 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 68, 144 |
| Conread position: | 3-168 |
| Cow position: | chr8:26693553-26693384 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 136 |
| Conread position: | 3-171 |
| Cow position: | chr8:35287796-35287967 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 3-187 |
| Cow position: | chr8:5961186-5960999 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 4-165 |
| Cow position: | chr8:45457379-45457543 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 4-171 |
| Cow position: | chr8:22997057-22997224 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 67, 124 |
| Conread position: | 4-173 |
| Cow position: | chr8:18793252-18793083 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 85 |
| Conread position: | 4-185 |
| Cow position: | chr8:30428240-30428062 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 5-108 |
| Cow position: | chr8:18897479-18897374 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 5-178 |
| Cow position: | chr8:22941353-22941177 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 5-182 |
| Cow position: | chr8:57041062-57041241 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 5-183 |
| Cow position: | chr8:19111622-19111442 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 55, 32 |
| Conread position: | 6-144 |
| Cow position: | chr8:15640713-15640579 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 6-179 |
| Cow position: | chr8:29810823-29810996 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 58, 105 |
| Conread position: | 7-156 |
| Cow position: | chr8:19616760-19616608 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-156 |
| Cow position: | chr8:51161445-51161297 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 59, 87 |
| Conread position: | 7-168 |
| Cow position: | chr8:40159585-40159747 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 45 |
| Conread position: | 8-172 |
| Cow position: | chr8:22396203-22396367 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 63, 50 |
| Conread position: | 16-158 |
| Cow position: | chr8:59148437-59148294 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 50, 110 |
| Conread position: | 17-166 |
| Cow position: | chr8:31718276-31718427 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 51, 115 |
| Conread position: | 18-177 |
| Cow position: | chr8:1975695-1975857 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 50-174 |
| Cow position: | chr8:37449260-37449137 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.