Cow genome map

Conread name: Ss1.1-Ova1-OVRM10106F11.5

Conread position: 1-145
Cow position: chr9:38755815-38755958 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 41

Conread position: 1-171
Cow position: chr9:8635508-8635681 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 1-172
Cow position: chr9:37409708-37409877 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 88, 60

Conread position: 1-172
Cow position: chr9:43325357-43325532 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 1-172
Cow position: chr9:45291959-45292134 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 65, 31

Conread position: 1-173
Cow position: chr9:36721608-36721434 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 1-174
Cow position: chr9:29001618-29001439 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 2-136
Cow position: chr9:38433215-38433081 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 91

Conread position: 2-144
Cow position: chr9:7778077-7777939 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 2-172
Cow position: chr9:45375950-45375776 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 2-181
Cow position: chr9:29008294-29008479 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 178

Conread position: 2-188
Cow position: chr9:33247773-33247960 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 62, 83

Conread position: 3-173
Cow position: chr9:12851540-12851368 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 3-182
Cow position: chr9:1498902-1498715 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 4-158
Cow position: chr9:10787789-10787634 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 62, 143

Conread position: 4-168
Cow position: chr9:32953733-32953567 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 74, 0

Conread position: 4-171
Cow position: chr9:19502824-19502655 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 34

Conread position: 4-173
Cow position: chr9:10577812-10577644 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 62, 54

Conread position: 4-173
Cow position: chr9:33278766-33278934 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 15

Conread position: 4-174
Cow position: chr9:14863007-14862837 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 91

Conread position: 4-175
Cow position: chr9:9210858-9211034 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 117

Conread position: 4-177
Cow position: chr9:53112903-53113079 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 172

Conread position: 4-206
Cow position: chr9:44688675-44688469 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 5-156
Cow position: chr9:58609740-58609586 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 5-168
Cow position: chr9:8040638-8040805 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 5-170
Cow position: chr9:52422681-52422516 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 61, 28

Conread position: 5-175
Cow position: chr9:8752832-8752660 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 5-183
Cow position: chr9:49270302-49270481 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 46

Conread position: 5-185
Cow position: chr9:35599110-35598927 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 173

Conread position: 5-187
Cow position: chr9:26520913-26521096 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 61, 85

Conread position: 14-152
Cow position: chr9:59868938-59869077 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 117

Conread position: 16-183
Cow position: chr9:34085838-34085670 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 110

Conread position: 33-165
Cow position: chr9:3743276-3743410 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.