Cow genome map

Conread name: Ss1.1-Ova1-OVRM10117D04.5

Conread position: 2-244
Cow position: chr24:40837584-40837825 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 34

Conread position: 3-360
Cow position: chr24:19404-19038 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 71

Conread position: 5-279
Cow position: chr24:20225550-20225824 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 59, 18

Conread position: 21-225
Cow position: chr24:10012589-10012786 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 83, 12

Conread position: 22-188
Cow position: chr24:18405492-18405314 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 83

Conread position: 23-156
Cow position: chr24:40055896-40055765 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 23-183
Cow position: chr24:18695445-18695611 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 23-187
Cow position: chr24:36555006-36554837 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 33

Conread position: 23-209
Cow position: chr24:35073918-35074107 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 147

Conread position: 23-268
Cow position: chr24:23616518-23616773 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 136

Conread position: 23-279
Cow position: chr24:6102650-6102915 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 195

Conread position: 24-279
Cow position: chr24:28990391-28990647 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 32

Conread position: 24-279
Cow position: chr24:32124813-32124555 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 34

Conread position: 24-279
Cow position: chr24:33153604-33153864 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 32

Conread position: 24-279
Cow position: chr24:33465783-33465534 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 118

Conread position: 24-285
Cow position: chr24:34410475-34410735 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 123, 32

Conread position: 24-332
Cow position: chr24:24755271-24755596 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 32

Conread position: 24-351
Cow position: chr24:15508710-15508380 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 80, 9

Conread position: 26-246
Cow position: chr24:39143437-39143667 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 225

Conread position: 27-279
Cow position: chr24:17311379-17311134 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 111, 34

Conread position: 28-183
Cow position: chr24:27719924-27719768 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 28

Conread position: 28-186
Cow position: chr24:34315183-34315351 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 28-195
Cow position: chr24:5867-5694 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 30

Conread position: 28-195
Cow position: chr24:250741-250574 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 33, 96

Conread position: 28-195
Cow position: chr24:35794905-35794731 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 73, 28

Conread position: 28-214
Cow position: chr24:21918391-21918205 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 76, 118

Conread position: 28-228
Cow position: chr24:20024442-20024650 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 109

Conread position: 28-232
Cow position: chr24:25320824-25321026 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 121

Conread position: 28-232
Cow position: chr24:39440726-39440527 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 97

Conread position: 28-240
Cow position: chr24:25092361-25092570 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 110

Conread position: 28-271
Cow position: chr24:5141775-5142022 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 28

Conread position: 28-271
Cow position: chr24:36404313-36404064 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 28

Conread position: 28-272
Cow position: chr24:3165652-3165899 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 34

Conread position: 28-272
Cow position: chr24:23187086-23186838 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 28

Conread position: 28-272
Cow position: chr24:28303521-28303274 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 112, 24

Conread position: 28-272
Cow position: chr24:29595980-29595730 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 24

Conread position: 28-272
Cow position: chr24:33222111-33221851 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 73, 28

Conread position: 28-273
Cow position: chr24:12851553-12851787 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 51

Conread position: 28-273
Cow position: chr24:28690522-28690766 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 69, 28

Conread position: 28-274
Cow position: chr24:23556496-23556251 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 120, 28

Conread position: 28-274
Cow position: chr24:40849989-40850234 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 122

Conread position: 28-275
Cow position: chr24:18374609-18374852 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 28, 0

Conread position: 28-275
Cow position: chr24:19736497-19736251 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 16

Conread position: 28-277
Cow position: chr24:24250559-24250808 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 28

Conread position: 28-277
Cow position: chr24:29679476-29679227 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 184

Conread position: 28-277
Cow position: chr24:32204963-32204709 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 28-277
Cow position: chr24:41980838-41980575 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 184

Conread position: 28-278
Cow position: chr24:6912520-6912277 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 102, 28

Conread position: 28-278
Cow position: chr24:18970677-18970421 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 124

Conread position: 28-278
Cow position: chr24:21519268-21519514 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 104

Conread position: 28-279
Cow position: chr24:1269629-1269871 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 28-279
Cow position: chr24:3493723-3493972 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 28-279
Cow position: chr24:10125696-10125972 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 28-279
Cow position: chr24:11886992-11887245 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 73, 28

Conread position: 28-279
Cow position: chr24:13626113-13626371 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 171
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 96

Conread position: 28-279
Cow position: chr24:15861770-15861506 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 28-279
Cow position: chr24:16089067-16089315 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 28

Conread position: 28-279
Cow position: chr24:16895605-16895350 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 81, 35

Conread position: 28-279
Cow position: chr24:16994717-16994969 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 157

Conread position: 28-279
Cow position: chr24:17104739-17104482 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 79, 20

Conread position: 28-279
Cow position: chr24:17294361-17294110 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 153, 184

Conread position: 28-279
Cow position: chr24:18357222-18356964 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 79, 28

Conread position: 28-279
Cow position: chr24:18390458-18390213 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 73, 122

Conread position: 28-279
Cow position: chr24:19535421-19535168 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 120

Conread position: 28-279
Cow position: chr24:19769324-19769583 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 46

Conread position: 28-279
Cow position: chr24:19800677-19800930 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 68, 196

Conread position: 28-279
Cow position: chr24:22079291-22079548 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 61, 187

Conread position: 28-279
Cow position: chr24:22647511-22647254 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 116

Conread position: 28-279
Cow position: chr24:24457415-24457163 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 113

Conread position: 28-279
Cow position: chr24:27267462-27267702 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 109

Conread position: 28-279
Cow position: chr24:27906269-27906526 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 79, 54

Conread position: 28-279
Cow position: chr24:28062783-28063035 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 81, 28

Conread position: 28-279
Cow position: chr24:28319369-28319121 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 110, 28

Conread position: 28-279
Cow position: chr24:28553716-28553478 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 192
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 77, 28

Conread position: 28-279
Cow position: chr24:28699888-28700139 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 68, 63

Conread position: 28-279
Cow position: chr24:28721722-28721972 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 73, 35

Conread position: 28-279
Cow position: chr24:29586824-29587086 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 36, 257

Conread position: 28-279
Cow position: chr24:29673350-29673609 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 32, 26

Conread position: 28-279
Cow position: chr24:31159448-31159703 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 198
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 73, 28

Conread position: 28-279
Cow position: chr24:31324112-31324372 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 28

Conread position: 28-279
Cow position: chr24:31359157-31359408 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 64, 28

Conread position: 28-279
Cow position: chr24:31816420-31816666 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 107, 15

Conread position: 28-279
Cow position: chr24:32070797-32071049 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 64, 28

Conread position: 28-279
Cow position: chr24:33372385-33372639 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 134

Conread position: 28-279
Cow position: chr24:33944235-33944489 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 76, 35

Conread position: 28-279
Cow position: chr24:34396343-34396091 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 73, 28

Conread position: 28-279
Cow position: chr24:35576704-35576452 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 118

Conread position: 28-279
Cow position: chr24:40129953-40130217 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 29, 0

Conread position: 28-279
Cow position: chr24:42103200-42103448 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 101

Conread position: 28-279
Cow position: chr24:42825663-42825417 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 28

Conread position: 28-279
Cow position: chr24:44041182-44040920 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 243

Conread position: 28-280
Cow position: chr24:30229302-30229566 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 31, 0

Conread position: 28-284
Cow position: chr24:8886742-8887003 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 123

Conread position: 28-287
Cow position: chr24:43364190-43364453 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 190

Conread position: 28-295
Cow position: chr24:39483308-39483581 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 28

Conread position: 28-316
Cow position: chr24:11840009-11840309 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 36, 133

Conread position: 28-329
Cow position: chr24:16268282-16267989 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 111, 28

Conread position: 28-332
Cow position: chr24:27748478-27748787 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 64, 35

Conread position: 28-332
Cow position: chr24:27874430-27874740 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 32, 107

Conread position: 28-332
Cow position: chr24:28496752-28496443 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 69, 28

Conread position: 28-347
Cow position: chr24:7917534-7917196 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 0

Conread position: 28-348
Cow position: chr24:32822948-32822615 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 28

Conread position: 28-349
Cow position: chr24:33724014-33723691 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 35

Conread position: 28-353
Cow position: chr24:30897707-30897372 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 71, 28

Conread position: 29-178
Cow position: chr24:30226772-30226927 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 38, 124

Conread position: 29-192
Cow position: chr24:39219011-39218839 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 97

Conread position: 29-232
Cow position: chr24:18734520-18734329 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 29-232
Cow position: chr24:28600032-28599819 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 29-232
Cow position: chr24:42345173-42344956 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 29-243
Cow position: chr24:18999879-19000099 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 45, 105

Conread position: 29-271
Cow position: chr24:31812020-31812269 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 27

Conread position: 29-274
Cow position: chr24:34532959-34533204 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 185, 77

Conread position: 29-278
Cow position: chr24:15373241-15373492 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 28

Conread position: 29-278
Cow position: chr24:28327252-28326994 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 27

Conread position: 29-279
Cow position: chr24:24491178-24490930 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 122, 37

Conread position: 29-279
Cow position: chr24:25112039-25112285 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 21

Conread position: 29-279
Cow position: chr24:33098660-33098385 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 29-346
Cow position: chr24:27054239-27054571 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 220
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 27

Conread position: 29-350
Cow position: chr24:27608266-27607927 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 227
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 63, 27

Conread position: 29-352
Cow position: chr24:2402542-2402192 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 238
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 27

Conread position: 29-386
Cow position: chr24:6132041-6131669 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 260
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 78, 34

Conread position: 30-301
Cow position: chr24:43683639-43683352 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 132

Conread position: 32-198
Cow position: chr24:34782951-34782781 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 69, 144

Conread position: 32-204
Cow position: chr24:27052660-27052481 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 32, 11

Conread position: 32-208
Cow position: chr24:39807974-39808152 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 60

Conread position: 32-231
Cow position: chr24:7913837-7914046 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 32-258
Cow position: chr24:34579127-34578910 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 87

Conread position: 32-271
Cow position: chr24:3430569-3430813 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 69, 13

Conread position: 32-272
Cow position: chr24:17860420-17860177 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 109, 24

Conread position: 32-277
Cow position: chr24:18331559-18331806 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 194
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 66, 24

Conread position: 32-277
Cow position: chr24:28253541-28253805 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 22

Conread position: 32-279
Cow position: chr24:14171859-14171606 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 74, 174

Conread position: 32-279
Cow position: chr24:16509805-16510065 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 112

Conread position: 32-279
Cow position: chr24:16645494-16645231 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 26, 0

Conread position: 32-279
Cow position: chr24:17832979-17832733 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 67, 112

Conread position: 32-279
Cow position: chr24:18485162-18484909 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 69, 24

Conread position: 32-279
Cow position: chr24:18741736-18741484 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 75, 119

Conread position: 32-279
Cow position: chr24:30235708-30235958 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 102, 24

Conread position: 32-279
Cow position: chr24:40592551-40592805 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 13

Conread position: 32-279
Cow position: chr24:43200441-43200188 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 56, 24

Conread position: 32-279
Cow position: chr24:44987548-44987287 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 29, 0

Conread position: 32-284
Cow position: chr24:43432627-43432881 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 110

Conread position: 32-296
Cow position: chr24:29063813-29063551 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 219, 32

Conread position: 32-306
Cow position: chr24:25194104-25194380 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 67, 30

Conread position: 32-306
Cow position: chr24:27726178-27725897 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 74, 11

Conread position: 32-328
Cow position: chr24:27824293-27824599 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 24

Conread position: 33-188
Cow position: chr24:42007575-42007737 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 33-265
Cow position: chr24:18243633-18243393 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 33-271
Cow position: chr24:201798-201557 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 69, 23

Conread position: 33-278
Cow position: chr24:44054318-44054081 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 23

Conread position: 33-279
Cow position: chr24:15347428-15347677 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 46

Conread position: 33-279
Cow position: chr24:32370083-32369827 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 33-279
Cow position: chr24:33230513-33230762 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 74, 10

Conread position: 33-284
Cow position: chr24:6450332-6450582 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 59, 155

Conread position: 33-288
Cow position: chr24:27290704-27290968 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 33-306
Cow position: chr24:20801510-20801231 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 60, 92

Conread position: 33-342
Cow position: chr24:211821-212147 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 74, 23

Conread position: 34-309
Cow position: chr24:25677874-25678137 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 195
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 50, 22

Conread position: 36-167
Cow position: chr24:24137018-24136885 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 111

Conread position: 36-232
Cow position: chr24:37024862-37025053 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 95

Conread position: 36-232
Cow position: chr24:38814807-38815008 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 63

Conread position: 36-242
Cow position: chr24:15707604-15707394 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 116

Conread position: 36-261
Cow position: chr24:18355062-18355278 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 79, 0

Conread position: 36-261
Cow position: chr24:37945795-37945560 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 116

Conread position: 36-274
Cow position: chr24:352766-352524 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 72, 20

Conread position: 36-274
Cow position: chr24:2096050-2095799 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 65, 20

Conread position: 36-279
Cow position: chr24:5754677-5754923 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 20

Conread position: 36-279
Cow position: chr24:30314193-30313938 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 234

Conread position: 36-279
Cow position: chr24:30484112-30483853 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 71, 0

Conread position: 36-329
Cow position: chr24:15246795-15246494 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 92, 20

Conread position: 36-332
Cow position: chr24:17955604-17955298 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 117

Conread position: 36-370
Cow position: chr24:20943006-20943339 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 71, 20

Conread position: 37-188
Cow position: chr24:27552735-27552891 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 67, 115

Conread position: 37-232
Cow position: chr24:35985883-35985689 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 110

Conread position: 37-279
Cow position: chr24:7476513-7476265 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 229

Conread position: 37-279
Cow position: chr24:10299923-10300164 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 22, 58

Conread position: 37-279
Cow position: chr24:18975040-18975297 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 55, 238

Conread position: 38-279
Cow position: chr24:19186802-19187025 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 97, 0

Conread position: 39-200
Cow position: chr24:15473202-15473367 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 27, 17

Conread position: 39-216
Cow position: chr24:10841374-10841182 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 39-232
Cow position: chr24:20250058-20249855 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 97

Conread position: 39-232
Cow position: chr24:26554759-26554556 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 39-241
Cow position: chr24:5633191-5632981 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 39-270
Cow position: chr24:19261518-19261299 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 39-278
Cow position: chr24:41423451-41423690 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 17

Conread position: 39-279
Cow position: chr24:18017069-18017315 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 39-279
Cow position: chr24:34008736-34008485 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 40-242
Cow position: chr24:39289895-39290096 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 40

Conread position: 40-245
Cow position: chr24:3152737-3152524 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 67, 26

Conread position: 40-279
Cow position: chr24:7777773-7777541 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 67, 16

Conread position: 40-279
Cow position: chr24:28289405-28289166 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 52, 16

Conread position: 41-243
Cow position: chr24:19474823-19474610 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 110

Conread position: 43-277
Cow position: chr24:11119130-11119363 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 5, 14

Conread position: 43-278
Cow position: chr24:27844676-27844441 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 89, 13

Conread position: 43-279
Cow position: chr24:814419-814182 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 91, 19

Conread position: 43-279
Cow position: chr24:25885315-25885071 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 61, 13

Conread position: 43-279
Cow position: chr24:27220245-27220002 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 147

Conread position: 43-279
Cow position: chr24:27630249-27630485 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 64, 13

Conread position: 43-279
Cow position: chr24:29389087-29389322 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 13

Conread position: 43-280
Cow position: chr24:4724819-4725057 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 94

Conread position: 43-330
Cow position: chr24:34742601-34742895 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 13

Conread position: 43-332
Cow position: chr24:32054505-32054811 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 58, 0

Conread position: 43-350
Cow position: chr24:34564969-34565275 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 20, 134

Conread position: 43-366
Cow position: chr24:6149871-6150194 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 218
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 13

Conread position: 44-272
Cow position: chr24:41755710-41755943 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 63, 12

Conread position: 44-277
Cow position: chr24:12200566-12200323 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 226

Conread position: 44-279
Cow position: chr24:2675169-2675398 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 62, 22

Conread position: 44-279
Cow position: chr24:38841557-38841334 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 46-269
Cow position: chr24:37395359-37395133 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 17

Conread position: 46-279
Cow position: chr24:18314099-18313845 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 60, 10

Conread position: 46-342
Cow position: chr24:35675394-35675709 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 63, 18

Conread position: 50-275
Cow position: chr24:36008338-36008569 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 156
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 199

Conread position: 53-279
Cow position: chr24:28233904-28234130 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 87, 146

Conread position: 55-278
Cow position: chr24:29170827-29171048 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 35, 88

Conread position: 56-274
Cow position: chr24:17434476-17434693 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 95

Conread position: 56-279
Cow position: chr24:19466063-19465830 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 215

Conread position: 56-279
Cow position: chr24:24662271-24662043 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 51, 28

Conread position: 56-279
Cow position: chr24:32739414-32739186 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 15, 124

Conread position: 56-332
Cow position: chr24:26732313-26732580 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 38, 25

Conread position: 56-332
Cow position: chr24:30545001-30544723 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 51, 102

Conread position: 56-350
Cow position: chr24:41985848-41986159 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 160

Conread position: 57-279
Cow position: chr24:389960-390191 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 65

Conread position: 57-279
Cow position: chr24:14550657-14550882 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 55

Conread position: 57-279
Cow position: chr24:34390156-34390364 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 98, 34

Conread position: 57-286
Cow position: chr24:38006846-38006623 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 39, 11

Conread position: 58-271
Cow position: chr24:10242921-10242704 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 86

Conread position: 58-272
Cow position: chr24:39905589-39905366 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 44, 91

Conread position: 59-232
Cow position: chr24:42364107-42364276 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 60

Conread position: 59-279
Cow position: chr24:38478521-38478305 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 7

Conread position: 61-279
Cow position: chr24:27713541-27713317 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 63-271
Cow position: chr24:24061945-24061724 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 165

Conread position: 65-274
Cow position: chr24:34272679-34272893 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 65-279
Cow position: chr24:35631854-35632067 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 73

Conread position: 66-278
Cow position: chr24:29606175-29605946 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 66-279
Cow position: chr24:27418230-27418016 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 136

Conread position: 68-295
Cow position: chr24:13352914-13353144 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 72-279
Cow position: chr24:35150396-35150606 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 132

Conread position: 72-279
Cow position: chr24:39523573-39523361 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 35, 69

Conread position: 73-340
Cow position: chr24:28045638-28045909 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 75, 18

Conread position: 77-279
Cow position: chr24:39791418-39791628 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 206

Conread position: 96-242
Cow position: chr24:40823988-40824133 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 41

Conread position: 97-332
Cow position: chr24:22999914-23000168 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 34

Conread position: 100-279
Cow position: chr24:2992970-2992794 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 80, 0

Conread position: 100-279
Cow position: chr24:6151702-6151876 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 101-271
Cow position: chr24:230185-230363 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 101-278
Cow position: chr24:28600530-28600345 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 41, 0

Conread position: 101-279
Cow position: chr24:20807444-20807622 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 34

Conread position: 101-279
Cow position: chr24:29561667-29561485 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 101-279
Cow position: chr24:37975074-37974893 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 101-317
Cow position: chr24:27900637-27900853 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 39, 143

Conread position: 102-271
Cow position: chr24:31309305-31309471 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 38

Conread position: 102-279
Cow position: chr24:19637494-19637677 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 28

Conread position: 102-311
Cow position: chr24:38811561-38811349 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 121, 28

Conread position: 103-260
Cow position: chr24:40389518-40389677 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 142

Conread position: 103-262
Cow position: chr24:20733931-20734102 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 78

Conread position: 103-262
Cow position: chr24:21894963-21895120 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 12

Conread position: 103-275
Cow position: chr24:16259328-16259155 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 71

Conread position: 103-279
Cow position: chr24:11028774-11028602 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 66

Conread position: 103-279
Cow position: chr24:12452693-12452871 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 134

Conread position: 103-279
Cow position: chr24:16895219-16895051 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 103-279
Cow position: chr24:28042883-28043063 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 103-279
Cow position: chr24:39911126-39910946 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 44, 156

Conread position: 103-279
Cow position: chr24:41405808-41405982 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 81, 31

Conread position: 103-284
Cow position: chr24:37823439-37823621 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 27

Conread position: 103-326
Cow position: chr24:25164944-25165177 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 103-332
Cow position: chr24:32194420-32194653 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 143

Conread position: 103-343
Cow position: chr24:7046837-7046600 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 202, 94

Conread position: 103-344
Cow position: chr24:116644-116406 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 25

Conread position: 104-271
Cow position: chr24:34496030-34496202 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 105-279
Cow position: chr24:18614912-18615088 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 146

Conread position: 108-280
Cow position: chr24:16118281-16118449 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 119-279
Cow position: chr24:14551395-14551549 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 51

Conread position: 121-279
Cow position: chr24:27202018-27202176 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 12, 75

Conread position: 125-235
Cow position: chr24:33598338-33598226 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 125-279
Cow position: chr24:11007391-11007544 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 75

Conread position: 125-332
Cow position: chr24:23824486-23824285 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 130-279
Cow position: chr24:28470742-28470592 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 133-279
Cow position: chr24:40404865-40404724 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 135-272
Cow position: chr24:34555981-34556115 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 135-279
Cow position: chr24:43832473-43832618 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 131, 29

Conread position: 136-279
Cow position: chr24:19623801-19623943 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 137-279
Cow position: chr24:20969716-20969576 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 137-286
Cow position: chr24:34896754-34896606 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 13, 30

Conread position: 144-278
Cow position: chr24:42726403-42726537 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 146-279
Cow position: chr24:34465551-34465418 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 147-251
Cow position: chr24:15480409-15480305 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 147-299
Cow position: chr24:27448600-27448751 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 115

Conread position: 148-279
Cow position: chr24:2730655-2730528 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 148-279
Cow position: chr24:7390376-7390249 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 150-279
Cow position: chr24:22133130-22133259 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 151-280
Cow position: chr24:18668538-18668666 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 155-279
Cow position: chr24:32891080-32890956 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 158-279
Cow position: chr24:26848764-26848645 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 160-279
Cow position: chr24:36286538-36286657 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 160-344
Cow position: chr24:14786348-14786531 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 171, 143

Conread position: 161-279
Cow position: chr24:5152493-5152611 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 84

Conread position: 169-333
Cow position: chr24:28024257-28024434 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 173-279
Cow position: chr24:22235449-22235555 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 176-279
Cow position: chr24:27553080-27553182 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 176-279
Cow position: chr24:32818315-32818215 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 178-279
Cow position: chr24:13058010-13058110 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 180-279
Cow position: chr24:161992-162091 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 181-279
Cow position: chr24:256016-256114 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 183-279
Cow position: chr24:39218560-39218464 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 324-520
Cow position: chr24:23988315-23988508 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 40

Show alignments to all cow chromosomes.